Carya illinoinensis (pecan): 122276288
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Entry
122276288 CDS
T08745
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
cill03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122276288
09124 Replication and repair
03420 Nucleotide excision repair
122276288
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cill01001
]
122276288
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122276288
03019 Messenger RNA biogenesis [BR:
cill03019
]
122276288
03400 DNA repair and recombination proteins [BR:
cill03400
]
122276288
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
122276288
2.7.11.23 [RNA-polymerase]-subunit kinase
122276288
Protein kinases [BR:
cill01001
]
Serine/threonine kinases: CMGC group
CDK family
122276288
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122276288
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122276288
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122276288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
HYPK_UBA
Seadorna_VP7
DUF6193
Motif
Other DBs
NCBI-GeneID:
122276288
NCBI-ProteinID:
XP_042941829
LinkDB
All DBs
Position
9:8048968..8062621
Genome browser
AA seq
407 aa
AA seq
DB search
MTELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQKVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDLV
YLPDYVEYQHVPAPPLRSLFPMTSDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLP
TDPDKLPRPAPKRDSRVSDFNSHDGPTVLSPPRKTRRVMPDREGLEGIFHHIDKIEANGE
NANRNEPVPMSVDFSIFGAKPPNRPTINSADRSHLKRKLDLEFQHPE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctcgatctgtccaagaaagtcgccgatagatatctgaagcgagaagtcctc
ggcgaaggtacctacggggtcgtctacaaagccattgatactaagacaggacagaaagtc
gcaattaaaaagattcggcttggcaagcaaaaggaaggggtaaattttacggcacttaga
gaaatcaagctccttaaagagcttaaagatccgaatataattgagttgattgatgcgttc
cctcataagggtaacttgcaccttgtgtttgagttcatggagacagaccttgaagctgtt
attcgggacaggaatatatttctttcaccggctgacataaaatcttatcttcagatgaca
cttaaaggacttgcttactgccacaagaaatgggttttacatagggatatgaaaccaaac
aacttgttaataggatctaatggacagctcaaacttgcagattttggtttagcacgaata
tttgggagcccagatcgcaagttcactcaccaggtttttgctcgatggtatagagcacct
gagctgttgtttggtaccaagcaatatggtgctggggtggatgtttgggctgccgcttgt
atatttgctgaacttctcctgcgtcgaccttttctgcagggttcaagtgacattgatcaa
ttgggaaagatctttgctgcgtttgggacaccaacaccatcccagtggcctgatctggta
taccttcctgattatgtggagtaccagcatgttcctgcaccccctttacgttccttgttt
ccaatgactagtgatgatgctttagatttgctgtcaaagatgtttacttatgatccgaaa
gctagaatatcagtgcagcaggcattagagcaccggtacttctcatctgcaccactgcct
acagatccagataaactccccagacctgcacctaagcgggattcgagggtttctgatttt
aattcacatgatggtcctactgtcttatcacctccaagaaagacaaggagagtgatgcca
gaccgtgagggtttggaaggaatttttcatcatatcgataagattgaggcaaatggtgaa
aatgcaaataggaatgaaccagtaccaatgtcagtagacttttctatctttggagcaaaa
cctccaaacaggcccacaattaacagtgctgacagatcacatttaaagaggaagttagat
ctggaattccagcaccccgaataa
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