Carya illinoinensis (pecan): 122276411
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Entry
122276411 CDS
T08745
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00906
Carotenoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122276411
Enzymes [BR:
cill01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
122276411
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
Pyr_redox
FAD_binding_2
NAD_binding_8
Pyr_redox_3
FAD_binding_3
Trp_halogenase
GIDA
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
122276411
NCBI-ProteinID:
XP_042942035
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Position
9:4596607..4599150
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AA seq
504 aa
AA seq
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MDTLLKTPNKLGFLHPLLGFPEKMSNSSSSKLQNQEFRFGPKKSHLKLVRNGFVKASTGA
LLELVPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP
KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDQSKKDLGRPYGRVNRKQLKSKML
QKCILNGVKFHQAKVIKVIHEESKSLLICNDGVTVQAAVVLDATGFSRCLVQYDKPYNPG
YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNNDIKLKEGNSKIPTFLYAMPFSANRIFL
EETSLVARPGMPMKDIQERMVARLRYLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVANSIVRYLGSDRNFSCNELSSEVWKDLWPIERRRQRE
FFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELIYFGLSLFSHASNTS
RIEIMGKGTVPLVNMINNLIQDRN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttactcaaaacacctaacaagcttggatttttgcacccacttcttgggttt
cctgaaaaaatgagtaattcaagctcttcaaaacttcaaaaccaggagtttagatttggt
cccaagaagtctcatctcaaactggttagaaatggttttgtaaaggctagtaccggtgct
cttttggagcttgttccagaaactaagaaggagaatcttgattttgagcttcctatgtat
gacccatcaaagggtcttgtggtggacttagcagttgtgggaggtggtcctgcaggtctg
gctgttgcgcagcaagtctctgaggcagggctttcagtttgtgcgattgacccatctcct
aaattaatttggcccaataattatggtgtttgggtggatgaatttgaggccatggacttg
cttgattgtcttgatactacctggtctggtgctgttgtgttcattgatgatcaatcaaag
aaagaccttggcagaccttatggaagggttaataggaagcagctgaagtcaaaaatgctg
caaaaatgcatattaaatggtgtcaagtttcaccaagctaaagttatcaaggttatccac
gaggagtccaagtctttgttgatttgcaatgatggtgtcacagttcaggctgctgtggtt
cttgatgccactggcttttcgagatgccttgttcagtatgataagccctataatcctgga
taccaagtggcttatgggattttagctgaggttgaagaacacccgtttgatgtggataaa
atggtttttatggactggagagattcacatctgaacaatgatataaagcttaaagaggga
aacagtaagatccccaccttcctatatgcaatgcccttttcggccaacaggatatttctt
gaagaaacttccctggtagctcgacctggaatgccaatgaaagatatccaagaaagaatg
gtggcaagattgaggtacctgggcataaaagtgaaaagcattgaggaagatgagcattgt
gtcattccgatgggtgggccccttccagtgctccctcaaagagttgttggaattggtggt
actgccgggatggtgcacccctcaactggttatatggtagcaaggactctagcagcagct
ccaattgttgcaaattccatagttcgataccttggttctgatagaaacttttcatgcaat
gaattgtcttcagaagtttggaaagacttatggcccatagagaggaggagacagagggag
ttcttctgttttggtatggatattcttttaaagctcgacttaccaggtacaaggaggttt
tttgatgctttttttgatctagaacctcgctattggcatggattcttgtcatctcgactg
tttcttcctgagcttatatattttgggctttccctgttctctcatgcttctaatacttct
agaatagagattatgggaaagggaactgttcctttggtaaacatgatcaacaacttgata
caagacagaaattaa
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