Carya illinoinensis (pecan): 122277558
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Entry
122277558 CDS
T08745
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122277558
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122277558
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122277558
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122277558
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HrpJ
HEPPP_synt_1
Cap4_nuclease
Ta1207
Motif
Other DBs
NCBI-GeneID:
122277558
NCBI-ProteinID:
XP_042943516
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All DBs
Position
9:complement(14228101..14238677)
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AA seq
420 aa
AA seq
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MLFSRISRIQRTGISGCRWFLFHRPDHHHQFFRSENPLHPTESTQKVLGCRETFSRDLPA
LHGFSHNIHHQSSSIVEEQQDPFSLVADELSLLANRLQSMVVAEVPKLASAAEYLFKMGV
EGKRFRPTVLLLMATALNVSVPEPYLSGPGDVSTKELRARQQSIAEITEMIHVASLLHDD
VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAALKNTEVVSLLAKVVEHLVTG
ETMQMTSTSQQCCSMEYYMQKTYYKTASLISNSCKAIALLAGQTAEVAMLAYEYGRNLGL
AFQLMDDILDFTGTSASLGKGSLSDIRHGIITAPMLFAMEEFPQLHAVVDQGFDDPANVD
LALEYLGKSRGIQRARELATKHANLAAAAIDSLPESNDEDVRKSRRALVDLTQRVITRTK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttattctctcggatttcgaggattcaaagaaccggcataagtgggtgtcgttggttt
ctctttcacagaccggaccaccatcaccaattctttcgttccgagaatcctctccatccg
actgagtctactcaaaaggttttgggctgtagagaaactttttcccgggatttgcctgcc
ttgcatggtttcagccataacatccatcatcagagcagttccatagttgaggaacagcaa
gacccgttttcacttgttgctgatgagttatcacttcttgctaatagattgcaatcaatg
gtagttgctgaggtccccaagcttgcatcagctgctgaatacttattcaaaatgggggtg
gaagggaagaggtttcgacccacggttttgttattgatggcaacagctttgaatgtgtct
gtaccagaaccatacctcagtggacctggagatgtttcgactaaggaactacgtgccaga
cagcaatctatagctgagatcactgagatgattcatgtggcaagccttctacatgatgat
gtcttggatgatgcagatacgagacgtggaataggatcattaaattttgtcatgggcaat
aagttagcagtgttagcaggagattttctgctctctcgagcttgtgtggcactcgccgca
ttgaaaaacacagaggttgtatcattacttgcaaaagttgtagagcatcttgtgacgggt
gaaaccatgcaaatgacttcgacttctcaacaatgttgtagcatggaatattatatgcag
aaaacatactacaagacggcatcactaatttccaacagctgcaaggcgattgcccttctt
gcggggcagactgcagaagttgcaatgttggcttatgagtatggcagaaatctgggattg
gcatttcaattgatggatgacattcttgatttcacaggcacatcagcttcccttggaaag
ggttctttatctgatatccgccatggaatcataactgctccaatgctgtttgccatggaa
gagttccctcagttgcatgcagttgttgaccagggatttgatgaccctgcgaatgttgat
cttgctcttgagtaccttgggaagagtcgtggaatacagagagcaagggagctagccaca
aagcatgccaaccttgctgcagcagcaattgattctctccccgagagcaatgatgaagac
gtaagaaaatcaaggagggcactcgtagatctcactcaaagggtcattactagaaccaag
tga
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