KEGG   Carya illinoinensis (pecan): 122292052
Entry
122292052         CDS       T08745                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic isoform X1
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill00900  Terpenoid backbone biosynthesis
cill01100  Metabolic pathways
cill01110  Biosynthesis of secondary metabolites
Module
cill_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    122292052
Enzymes [BR:cill01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     122292052
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     122292052
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 122292052
NCBI-ProteinID: XP_042956166
LinkDB
Position
13:14416767..14425350
AA seq 740 aa
MATGAVPASFTCLKSRDPSLGFTRSMDFVRISDMKRVKTGRRKVLVIRNSNPGSDIVELQ
AASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAATV
EEVMRIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVADC
FDKIRVNPGNFADRRAQFEKLEYTEEDYQKELEHIEQVFIPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMY
VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGMRAAELQRGVAPFEEKNRHYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSL
DQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVDDDDGRLALKRLIDISMGII
TPLSEQLTKPLPNSMVLVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEELEILKDIDATM
LLHELPLTEEKISRVHAARRLFEYLADSSLDFPVIHHIQFPKGIHRDDLVIGAGTNAGAL
LVDGLGDGVLLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQ
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEHAT
DALIQLIKDHGRWVDPPAEE
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcgaccggagctgtaccggcttcctttacgtgtctgaagagcagggacccaagctta
ggtttcacgagaagtatggattttgtgagaatttctgatatgaaaagggttaagactggt
agaagaaaggtcttggtgatacgcaattcaaatcccggctcagatattgttgaacttcag
gctgcatcggaggggagccctctcttggttcctcgtcaaaagtattgtgaatccattcac
aaaactgtcaggaggaaaacacggacagtgatggttggaaacgtggctcttggtagtgag
catcccatacggattcaaacaatgaccacaaccgacactaaagatgttgctgcaacagtt
gaagaggtaatgagaatagcagacaaaggagcagatattgttcggataacagtccaaggg
aagagagaagcagatgcatgttttgaaataaagaactctcttgtgcagaaaaattacaat
atacctctggtggcagatattcattttgctccatccgttgcgctgcgtgttgcagactgc
tttgacaagattcgtgtcaaccctggaaattttgctgataggcgggctcagtttgagaag
ctagagtacacagaggaggactatcagaaagaattagagcatatcgagcaggtttttatt
ccattggttgagaaatgtaagaagtatggaagagcaatgcggattggtaccaaccatggg
agtctttcagatcgtataatgagctactatggggattctcctaggggaatggttgaatct
gcatttgagtttgcaaggatatgccggaagttggacttccataatttcgtcttttcaatg
aaagcaagcaacccagttgtcatggtccaggcataccgtctacttgttgcagaaatgtat
gtccatggctgggattatccgttacacttgggagttactgaagctggagaaggtgaggat
gggcggatgaaatctgcaattggcattgggacccttcttcaggatggtctaggcgatacg
atcagggtgtctctgacagaaccaccggaggaggaaatagatccctgccgaagattggcc
aatcttggtatgagagcagctgaacttcagcgaggagtggcaccatttgaagaaaagaac
aggcattattttgatttccagcgccgatctggtcaattgccaatgcagaaagagggtgag
gaggtggattatagaggtgtcctgcaccgtgacggttctgtccttatgtcagtttccctg
gatcaattgaagatgccagagctcctatacaagtcacttgcagcaaaacttgttgttggc
atgccatttaaggatctggcaacagtggactcaatcttattgagagagcttccaccagta
gatgatgatgatgggcggctagctctcaaaaggttgatagatataagcatggggattata
actcccttgtcagagcagctaacaaagccattgcccaattccatggttttggtaaacctg
aaggaattatcaactggtgcttacaagcttttgccagaaggcacacgtttggttgtgtct
gtacgtggtgatgagccctatgaagagctagaaatcctcaaagatatagatgctaccatg
cttcttcatgaactacctcttacagaagaaaaaatcagcagagtgcatgcagcaaggagg
ctatttgagtacctagcagacagttctctggacttccctgtaattcaccatattcagttc
ccaaaaggaattcacagggatgacttggtcattggtgccggtaccaatgcgggagccctt
cttgtagatgggctaggagatggagtcctattagaagccccagatcaggattttgatttt
cttcggaatacatctttcaatttactacaaggctgtagaatgcggaatacaaagacggag
tacgtgtcatgcccatcatgtggcagaactttgtttgatcttcaagaaataagtgcacaa
atacgagagaagacatcacacttgcctggtgtttcaattgcaataatgggttgcattgta
aatggtccgggggagatggctgatgcagattttggatatgttggtggtgctcccggaaag
attgacctttatgttgggaagacggtggtgaagcgcggaattgcgatggagcatgcaact
gatgccttgatccagcttataaaggatcatggccgctgggtcgaccctcctgcagaagag
taa

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