KEGG   Carya illinoinensis (pecan): 122297263
Entry
122297263         CDS       T08745                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03020  RNA polymerase
cill03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122297263
  09124 Replication and repair
   03420 Nucleotide excision repair
    122297263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122297263
   03400 DNA repair and recombination proteins [BR:cill03400]
    122297263
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122297263
  RNA polymerase III system
   RNA polymerase III
     122297263
  RNA polymerase I system
   RNA polymerase I
     122297263
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122297263
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DNA_pol3_alpha Mrr_cat
Other DBs
NCBI-GeneID: 122297263
NCBI-ProteinID: XP_042963212
LinkDB
Position
2:3436490..3441689
AA seq 206 aa
MTLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKNKYGESMKREDLVINKSK
RNNSSDQIYIFFPEEQKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSINEISTK
FHLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRMQVTDPVARYYG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgacactatcggaggaggaaatcactaggcttttcaggatccgaagaacggtgatgcaa
atgctgaaggaccgcggttattttgttggggactttgagattgacatgaccaaagagcag
ttcaagaataaatatggggagagcatgaaaagggaagaccttgttatcaataaatccaag
cgaaataatagctctgatcagatttatatcttcttccctgaggaacaaaaggttggtgtt
aagacaatgaagacttattcccagcgcatgaaatcagagaatgtctttagagcaatcttg
gttgttcaacaaaatttgacgccatttgctcggagctccataaatgagatttctacaaaa
ttccacttggaggttttccaggaggcagagttgttgataaacattaaagagcatgtgctt
gttcctgagcatcaggtgcttacaaatgaggagaagaagactttgctggagaggtacact
gtgaaagaaacacagctgcctcgtatgcaagtgacagatcctgttgcaagatactatgga
ctgaagcgtggacaggttgtgaagataatccggccaagtgaaactgcaggacgatacatc
acttaccgatacgtagtatga

DBGET integrated database retrieval system