Carya illinoinensis (pecan): 122304133
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Entry
122304133 CDS
T08745
Name
(RefSeq) phytoene synthase 2, chloroplastic-like isoform X1
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00906
Carotenoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122304133
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122304133
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
122304133
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122304133
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
122304133
NCBI-ProteinID:
XP_042972151
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All DBs
Position
3:32547675..32551003
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AA seq
401 aa
AA seq
DB search
MSAILWVVSPKENAQSLLSLIPRNGRRRRCKFNSRLSLSAYSNAVANPSRSSEERVYELV
LKQAALVRELRKESALDLGKTIETDGTTDWNLLNKAYERCGEVCAEYAKTFYLGTLLMTP
ERRRAIWAIYVWCRRTDELVDGPNASHITPKAMERWEKRLTDLFEGRPYDMYDAALSDTV
SKFPVDVQANSTSITCFLGQPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSV
PVMGIAPKSKVSTERIYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELACSGLSDE
DIFRGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSASRWPVWASLLLYRQILDAIEA
NDYNNFTKRAYVGKAKKLVSLPAAYGRALLGPSKLVELVKR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctattctttgggtggtttctccgaaggagaacgctcagtctctgctcagtctt
attccaagaaacggcagaaggagaaggtgtaaattcaactcaagacttagcttatctgct
tattcaaatgctgttgcgaacccatcgagatcctcggaggagagggtgtatgaattggtg
ctaaagcaagcagctctggttagagagctaaggaaagagagtgctcttgatttggggaaa
accatcgagactgatgggacgactgattggaatctgttgaataaggcttacgagaggtgt
ggcgaggtctgtgccgaatatgccaagactttttacttgggtacattacttatgacgcca
gaacgcagaagagctatttgggcaatttatgtgtggtgcaggaggactgacgagcttgtg
gatgggcctaatgcttcacacattacacccaaggctatggaaagatgggaaaaaagactc
accgacctctttgaaggtcgcccgtatgacatgtacgatgctgccctctctgatacagtc
tcaaagttccctgtggatgtacaggccaactcaacatcgattacttgcttccttggacag
cccttcaaagacatgatagaaggaatgaggttagacttgagaaaatcaagatacgacaac
ttcgacgagctctacctttactgctactatgttgccgggactgtcggactcatgagtgtt
ccggttatggggatagcaccaaaatcaaaggtttcaaccgagagaatttataatgcggca
ttagcccttggaattgctaatcaactcaccaacatactcagagacgttggagaagatgct
aggagaggaagaatctatctacctcaagatgaactagcatgttctggactttcagatgag
gatatatttcgaggcaaagtgacagataaatggcggagtttcatgaaggggcagataaag
cgagcgaggatgttctttgatgaagcagagaagggtgttgcagagctcagctcagccagt
agatggcccgtctgggcatctttgttgctatatcgacagatcttagatgccatcgaagct
aatgattacaacaacttcacaaaacgtgcttacgtaggaaaagcaaagaaacttgtctcg
cttcctgcagcctatggtagggcacttcttggcccctcaaaattggtcgagttggtaaag
agatga
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