Carya illinoinensis (pecan): 122307234
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Entry
122307234 CDS
T08745
Name
(RefSeq) ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
cill04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122307234
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122307234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122307234
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
122307234
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
122307234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
UCR_Fe-S_N
Motif
Other DBs
NCBI-GeneID:
122307234
NCBI-ProteinID:
XP_042975902
LinkDB
All DBs
Position
4:11962822..12001964
Genome browser
AA seq
1340 aa
AA seq
DB search
MPSLQLLQLTEHGRSFVASRRKTLLVATGILAAGGTAAYVQSRFSCRKPNSFSHYNGLND
AKQKSEKVPRDDNNVKKTKRKKGGLKSLQVLAGVLLFEMGKMGTRDLLALLAMVVLRTAL
GNRLAKVQGFLFRAAFLRRVPLFFRLISENIILCFLLSAMHSTSNYITGTLSLRFRKILT
RLIHTHYFENMAYYKISNVDGRINNPEQRIASDVPRFCSELSELVQDDLTAVTDGLLYTW
RLCSYASPKYVFWILAYVAGAGAMIRNFSPAFGKLMSEEQQLEGDYRQLHSRLRTHAESI
AFYGGERREESHIQQKFKTLIRHMSVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFS
GHLRPDTSTIGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELIVTS
RELSMVNDKSSLQRDGSSNYISEANYIEFAGVKVVTPSGNVLVDDLTLRVESGSNLLITG
PNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPHT
VDQEVEHLTPSEMVELLKNVDLEYLLERYPLEKEINWGDELSLGEQQRLGMARLFYHKPK
FAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYK
IEDSPVHSEADITVVKSTDTERQSGALAVQRAFATAGKNSTRSCSNAQSYITEVIAVSPP
VDKTVPLAVFPQIQMTPRLLSLRVAAMFKILVPTLLDRQGAQFLAVALLVVSRTWISDRI
ASLNGTTVKFVLEQDKASFIRLIGVSVLQSAASSFVAPSLRHLKARLALGWRIRLTQHLL
KNYLRNNAFYKVFQMSNKNIDADQRLTHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKL
LTGQKGVAILYAYMLLGLGFLRTVAPDFGELASKEQQLEGTFRFMHERLRTHAESVAFFG
GGAREKAMIELRFRELLNHSMSLLKKKWLFGILDDFTTKQLPNNVTWGLSLLYAMEHKGD
RALVSTQGELAHALRFLASVVSQSFLAFGDILQLHKKFLELSGGINRIFELEELLHAAQS
ADSLSDIKSPSDRRDHYSEDTISFSEVDTITPAQKMLARQLTCDIVPGKSLLVTGPNGSG
KSSVFRVLRGLWPVVSGRLTKPSQDIDEAAGSGCGVFYVPQRPYTCLGTLRDQIIYPLSY
EEAELRALKLYGKGQNTPDTKNVLDSCLKTILENVRLNYLLERDEGDWDASLNWEDILSL
GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYRLATNLGITVVTSSQRPALIPFH
SKELRLIDGEGNWELRLIKR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcaacttttgcaattaactgagcatggtagaagttttgtggcttcgaga
aggaaaactctacttgttgccactggtatcctagctgctggcggaactgctgcatacgtt
caatcaaggtttagctgtcgaaagcccaattcttttagtcattataatggtcttaatgat
gctaaacaaaaatcagagaaggtgcctagggatgacaataatgtaaagaaaacgaaacga
aagaaaggaggattgaagtcacttcaagtccttgctggagtcctactgtttgagatggga
aaaatgggtacgagggacctcttagctttactggccatggtggtgttgcgaactgcttta
ggaaacaggctggcaaaagtgcagggatttttattccgcgctgcttttcttcgacgtgta
ccattatttttccggttgatttcggaaaatattatattatgttttcttctttcagccatg
cattcgacctcaaattacattacagggacccttagtttgcggttcagaaagatattgacg
aggcttatccacactcattattttgagaatatggcttattacaaaatatcaaatgttgat
ggacggataaataatcccgaacaacgaattgcaagtgatgtaccgaggttctgttcagag
ttgagtgagcttgtacaggatgatctaaccgcagtgactgatggtctgctctatacttgg
cgtctatgttcttatgccagccccaaatatgtcttctggattttggcctacgtagcagga
gcaggggccatgattagaaacttttctcctgcttttgggaaacttatgtctgaagaacaa
caattggaaggagactatcgacaacttcattcacgattaaggacacatgcagaaagtata
gcattttatggtggagaaaggagagaagaatctcacattcagcaaaagtttaaaaccctg
attaggcacatgagtgttgtccttcatgatcattggtggtttggcatgattcaggatttc
ttactcaagtatcttggtgctacagttgccgttatcttaatcattgagcccttcttttct
ggccatctgcgacctgacacttcaaccattgggcgtgcagagatgttgagcaatttaaga
taccatactagtgttataatttcactatttcagtctcttgggactctttctattagttca
agacgacttaatcgtctcagtggttatgctgaccgcattcatgagttaatcgtcacatca
agagagctaagtatggttaatgataaatcttctctgcagagagatgggagctctaattac
attagtgaagctaattacattgagtttgctggtgtcaaggttgttaccccctctggtaat
gtcttggtggatgatttgactcttagggttgaatcaggatctaatcttctgatcacaggt
cccaatggtagtggaaagagctcactttttcgagttttaggaggcctctggcctctagta
tctggccacattgtgaaacctggggttggttctgatcttaataaggagattttctatgtg
ccacaacgaccatacactgctgtaggaacacttagggatcagttaatttatcctcatact
gtagatcaagaggttgagcatctcactcctagtgaaatggtggagctattgaaaaatgtt
gaccttgagtacctgttagagcgttacccacttgaaaaagagattaactggggagatgaa
ctatctctgggcgagcaacaaagattggggatggccagactgttctaccataagcctaaa
tttgcaattcttgatgagtgcacgagtgcagtcacaactgatatggaggagcgcttttgc
gcgaaagttcgagcaatgggaacatcatgcataactatatcacatcgaccagcactagtt
gcatttcatgacgtggtgttgtctttggatggtgaaggaggctggagtgttcattataaa
atagaagattctcctgtccatagcgaagcagatataactgtggtgaagagtactgacaca
gaacgccagagtggtgcattggctgtacaacgagcatttgcgacagctggaaagaattct
actcgctcatgttccaatgcacaatcatacataactgaggtgatagcagtgtctcctcct
gtggataaaacagttccattggcagtgtttccacaaatccaaatgactccaaggttattg
tcattgagagtagctgccatgttcaaaatactggtaccaacattacttgatagacaagga
gcacaattccttgcagttgctcttctcgttgtatcaagaacatggatctctgatcgaatt
gcctcactgaatggaaccaccgtgaagtttgttttggagcaggataaagcatcctttatt
cggctaattggtgttagtgttcttcaaagtgctgcatcttctttcgttgcaccttcttta
aggcacttgaaagccagactggcccttgggtggaggatccgtttgactcaacatttactg
aagaactatttgagaaataatgcattttataaggtctttcaaatgtcaaacaaaaatatt
gatgcagatcagagattaactcatgatctggaaaagttgactactgatttgtcgggactg
gttactggaatggtaaagccatctgtggacattctctggttcacatggagaatgaagctg
ttaacaggtcagaagggagttgccatattgtatgcctatatgttactgggtctgggtttt
ctaagaactgttgctcctgacttcggtgagctggcaagtaaagaacaacaacttgaaggg
acctttaggttcatgcatgaaagactgcgcactcatgctgaatctgttgctttctttggg
ggtggtgctcgagaaaaagctatgattgagttgagattcagggagcttctcaatcactcc
atgtcacttttgaaaaagaaatggctgtttggtatacttgatgattttaccaccaagcaa
ctcccaaataatgtgacttggggcttgagcttgttatatgctatggaacacaagggtgac
cgagcgttggtttctactcagggtgagctggcacatgcattgcggttcttagcttctgtt
gtatctcaaagcttcttagcttttggtgacattcttcaattgcataaaaaattccttgag
ctctctggtggcattaaccgaatttttgagcttgaagagcttctacatgctgcacagtct
gcggactctctgtctgatatcaagtcaccatcagacaggagagatcattactctgaagac
accatttccttctctgaagtggataccattaccccagcacagaaaatgttggctaggcag
ttgacatgtgacatagtaccagggaaaagtctgcttgttactggtccaaacgggagcggg
aaaagttcagtcttcagagtccttagaggtctatggcccgttgtaagtggaagactcact
aaaccatcccaagatattgatgaagcggctggatctggctgtggtgttttctatgttcct
cagcgaccttacacatgcttaggaaccctgagggatcaaattatatatcctctctcctat
gaggaggcagaattgagggcattaaagttgtatggaaaaggtcaaaacactcctgacacc
aagaacgtactggattcatgcttgaaaactattttggagaatgttcgattaaattatctc
ttggaaagagatgaaggtgattgggatgctagtctgaattgggaagatattctttctctt
ggagaacaacagagattgggcatggcacgcttattctttcacaagcctaaatttggcatc
cttgatgagtgcaccaacgcaaccagtgttgatgtcgaagaacacctttataggcttgca
acaaatttgggcatcacagttgttacctcctcacaacgtccggcgttaataccattccat
tccaaggaattacggctaattgatggtgagggcaactgggaacttcgtttgatcaagcga
tga
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