Carya illinoinensis (pecan): 122309993
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Entry
122309993 CDS
T08745
Name
(RefSeq) glutamine--tRNA ligase-like isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122309993
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122309993
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122309993
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
122309993
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (A)
122309993
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122309993
Prokaryotic type
Other AARSs
122309993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
122309993
NCBI-ProteinID:
XP_042979788
LinkDB
All DBs
Position
5:complement(45257247..45267122)
Genome browser
AA seq
742 aa
AA seq
DB search
MPVKDESPDKEKYLDLFLKIGLDERTARNTVANSKVTANLVSVIHKAVTEGCRRTVGNLL
YTVAKKYPANALVHRPTLLQYIVSSKIKTTAQLEAGLSFFVATASDDFKLDALEEACGVG
VEVSAEDIEQAVNDVFEENKNLILEKRYRTNVGELLGHVRKRHPWADLKSLKQFVDAKFY
DLLGERTAADNEKTSKKKKDNPAEVEVKTVAVVSPEQQSEEELNPFLIFPRPQENFKVHT
EVFFSDGSVLRCCNTKELLEKHLNATGGKVLTRFPPEPNGYLHIGHAKITYTSDYFQELY
NLAVELIRRGRAYVDHQTPDEIKEYREKKMNSPWRDRPVAESLKLFDDMRKGLIEEGKAT
LRMKQDMQNDNYNILLLIHMPETSGLSIPVMIMLTALWILLRILHIRYVVFAFDSFVHLF
ETRPASYYWLLHALSLYQPYVWEYSRLNVTNTVMSKRKLNRLVTDKWVDGWDDPCLMTLA
GLRRRGVTSTSINAFVRGVGITRSDNSTINLDRLEYHIREELNKTVPRAMVVLHPLKVVI
TNLEAGSIIDLDVKKWPEAQSDDASAFYKVPFSNTVYIEHSDFRMKDSKDYYGLAPGKSV
LLRYAFPIKCTEVILSDDKETILEIRAEYDPSKKTKPKGVLHWVAEPSPGVDPLRVEVRL
FDKLFLSENPAELDDWLADLNPQSKVVISSAYAVPLLKNAAVGDRFQFERLGFFVLDRDS
TPEKLVFNRTVTLRDSYSKGGK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaaggacgagagccctgacaaggagaagtacttagacttgtttctgaagatc
ggattggacgaacgaaccgcgcgaaacaccgtcgccaacagcaaggttacggccaatctg
gtttctgttattcacaaggctgtcaccgagggatgcaggcggactgttggaaatctccta
tacacggttgctaaaaaatatccagcaaatgcccttgtgcatcgcccaaccttgctgcaa
tacattgtttcgtcaaagattaaaactacggctcagttagaagcgggtctttcatttttt
gtagctactgcatcagatgattttaagttggatgcactcgaagaagcatgtggggttggt
gttgaggtttcagcagaagatattgaacaagctgttaatgatgtttttgaagagaataag
aatttgattttggagaaacgatatcgaactaatgttggtgaattattaggtcacgttcgg
aagaggcacccatgggctgatctgaagagcctcaagcaatttgttgatgcaaaattttat
gatctacttggtgaaaggacagcagctgataatgaaaagacttccaagaagaagaaagat
aaccccgctgaagtagaggttaaaacagttgccgttgtttctccagaacagcaatctgaa
gaagaacttaatccatttttgatatttcctcgaccacaggaaaatttcaaggtgcacact
gaagtatttttcagtgatggctctgtccttaggtgttgcaatacaaaggaactgctcgaa
aaacacttgaacgcaacgggagggaaagttttaactcgctttcctcctgaaccaaatggt
tatttgcatattggtcatgccaagataacttacaccagtgattattttcaagagttgtac
aatttagccgtggagctcatacgaaggggtcgtgcatacgttgatcatcagacacctgac
gagataaaggagtacagagaaaaaaagatgaacagtccttggagggacagacctgttgca
gaatcattgaaactttttgatgatatgagaaaaggccttattgaagaagggaaagcgaca
ttgaggatgaagcaagacatgcagaatgataattataatattttactcctcatccacatg
ccggagacaagtggtttatctatcccagttatgattatgctcactgcattgtggattctc
ttgagaatattacacattcgatatgttgtttttgcctttgatagctttgttcacttattt
gagacacgccctgcttcatactattggctattacatgcgctgagcctttaccaaccatat
gtatgggaatattcacgacttaatgttactaacacggtgatgtctaagcggaagctaaat
cgattggtgacagacaagtgggttgatggttgggatgacccttgccttatgacactagct
ggtttgcgtcgtagaggtgtgacttcaacgtcaattaatgcttttgttcgaggagttggg
atcactagaagtgataatagtacaataaatttggatcgccttgagtatcacataagagaa
gaactaaacaaaacggtgcctcgtgcaatggtcgtgctacatccgctgaaggttgttatc
acaaacctagaagctggctcaataatagatcttgatgtaaagaaatggcccgaagcccaa
tcagacgatgcatctgctttttacaaggttccattttccaatactgtgtacattgaacat
tctgattttcgaatgaaagattccaaggattactatggacttgctcctggtaaatctgtc
ctgctcagatatgcatttccgataaagtgcactgaagttatcctatctgatgataaggaa
actattctagagatccgggctgagtatgatccctctaagaagacaaagcctaagggtgtt
cttcattgggtggctgaaccttcccctggggttgatccactcagggtggaagtcagattg
tttgacaaattgttcctttcggagaatccagctgaacttgatgattggcttgctgatctg
aaccctcagtccaaagtggtgatttccagtgcatatgctgtacccttactgaaaaatgct
gcagttggagacagattccagttcgaaaggcttggcttttttgtgcttgatagagattcc
actcctgaaaagcttgtcttcaatagaacagtcacattaagagacagctatagtaagggt
gggaagtag
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