Carya illinoinensis (pecan): 122318011
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Entry
122318011 CDS
T08745
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122318011
Enzymes [BR:
cill01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
122318011
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122318011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
PrmA
MTS
Methyltransf_31
Methyltransf_4
Ubie_methyltran
CMAS
UPF0020
GidB
PCMT
Methyltransf_18
Methyltransf_23
Met_10
DREV
Cons_hypoth95
Spermine_synth
tRNA_U5-meth_tr
MetW
BpsA_C
DOT1
Motif
Other DBs
NCBI-GeneID:
122318011
NCBI-ProteinID:
XP_042991064
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All DBs
Position
8:30771930..30773541
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AA seq
390 aa
AA seq
DB search
MLRLPKSLSKFVTGQRSLPLRQLHARSSRRRSHPKNDDEDKILRRQENREAHLHLYKSRG
QHILTNPRVLDSIVRKSHIKPTDTVLEIGPGTGNLTLRLLEAAKYVVAVEIDKRMVEVLH
KRVAERGLQNRLSVICNDALKTEFPQFDLVVANIPYGISSPLVAKLVYGANPFRSATLLL
QKEFARRLLANPGDSEFNRLAVNVKLVADVEFSMDVSKRDFVPCPKVDSSVVIIRPKAEI
PDVNLDEWWAFTRTCFGKKNKTLGATFKQKRKLLDLLKLSTKTCSSSESAASDHNCDHSN
KAARATDDEGDTDETEYSLSICLDTRMSMFREKVLGVLNSGSFEDKRPSKLSNEELLHLL
ALFNQAGVYFHDHSKPRDEDSVELAAVLSL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtctccccaagtctctttccaagttcgtcaccgggcaacgttcgcttccgctt
cgtcaacttcatgcgaggtccagtcgtcgtcgtagccatcccaagaacgacgatgaggat
aagattctcagaagacaggagaatcgagaggctcatttacatctgtacaagagcaggggc
caacacatcctcaccaacccaagagtcctcgactccattgtccgaaaatcccacatcaag
cccaccgatacagtcctagagatcggacccggtaccggaaatctcaccctgaggcttcta
gaagctgccaaatatgtcgtcgctgttgaaattgataaacgaatggtggaggttctccac
aaacgcgtagccgagcggggtcttcaaaatcgtctcagtgttatatgtaatgacgcattg
aagaccgagtttcctcaatttgatcttgtggtagccaacatcccgtatggaatatcttct
cctctcgtggctaaattagtctacggggcgaacccatttaggagcgccactcttctcctc
cagaaagagtttgcacggagactgttggcgaatcctggtgactcagagttcaaccgcttg
gcggtaaatgtgaagctggttgctgatgtggagttctccatggacgtgagcaaaagggac
tttgttccatgtccaaaggttgactcatccgtggttattatacgtcccaaagctgaaatt
cctgatgtgaatctggatgagtggtgggctttcacgagaacctgttttggcaagaaaaac
aagacactaggtgctacatttaagcagaagaggaagttgttggatttgttgaaactgtcc
acaaagacttgctcaagtagtgaaagtgctgccagcgaccacaattgtgatcacagcaac
aaggctgctcgtgctactgatgatgaaggggacactgatgaaacagaatattctttatct
atttgcttggatacgcggatgagtatgttcagagagaaggtccttggagttctaaattca
ggtagttttgaagataagaggccttcaaagctgtctaatgaggagttactgcatttactc
gcattatttaatcaagctggagtttattttcatgatcactcaaagcctagggatgaagac
agtgtagagcttgcagcagttctcagcttatag
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