Coccidioides immitis: CIMG_09144
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Entry
CIMG_09144 CDS
T01114
Name
(RefSeq) protein Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cim
Coccidioides immitis
Pathway
cim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIMG_09144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_09144
Enzymes [BR:
cim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CIMG_09144
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CIMG_09144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
ATP_bind_1
AAA_24
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
4558253
NCBI-ProteinID:
XP_001239523
UniProt:
Q1DKL9
LinkDB
All DBs
AA seq
562 aa
AA seq
DB search
MSLPGLELSQQPIEARRAPPQPTQISLPKGSEWRFEVAFGNTTRVKLLAGTAELFGTELA
TSQTYTFSGTKAAIYTWHGCTLEVGAGDPVPIGPVGSAPVPPGPGNGGCQVEYIAEETPM
AEYANVHFALETMRHDAKAAGRDGPRVLILGPEDAGKTSLAKILTGYATKMGRQPLVVNL
DPSEGMLSVPGALTATAFRSMIDVEEGWGSSPMSGPSPIPVKLPLVYFYGLPACLDGDGS
YYKAIVSRLALAVTGRMAEDSDAREAGVIIDTPGIIGQGKGASEDVIHHIVTEFSISTIL
VIGSERLYSTMVKNYDNKPIATSATAAASDERISVVKLTKSGGCVDRDATFMKYVRESQI
RSYFFGSPVPSTASSALSLSSTTTGTTMTLSPHTSQVDFNSLSIYSITIATEGEEDEYDP
SKFDSFLPGGHEENDHNTSLTGTTSLQPPSGLLPGLRSELPSATTGFPSASTSSTTPFTN
LPSPAPMSLANTLLAITNAAPNASLDEVRDASIMGFIYIADVDEKKGQGGKLRLLAPVGG
RVPNRAMIWGRKWPGEVVGLIG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccgggttagagctttcacaacagcccatcgaagcccgaagagctcccccg
caaccgacgcagatcagtcttcccaagggatcggaatggagatttgaagtcgctttcggg
aatacaacccgggtgaagttactcgcgggcactgcagaattattcggcactgaacttgct
acgtcgcaaacttacactttctctggaacgaaagccgcaatatacacatggcacggatgt
acgctggaagtcggggcgggtgaccccgttcccattgggcctgtgggaagtgcgcctgta
cctcctggccccgggaacgggggatgtcaggtcgaatacatcgccgaagagacgcccatg
gccgaatatgcgaatgtgcacttcgcgctggagacgatgaggcatgatgccaaagccgcc
gggagagatgggccacgggtgctcatcctcggaccggaagatgcggggaagacgagtctg
gcgaagatattgacgggatatgcgacgaagatggggagacagcccttggttgtgaatttg
gatccgtcggagggcatgctgagtgttcctggggcgttgacggcgacggcgtttcggtct
atgatcgatgtggaagaagggtgggggagtagtccgatgtctggccctagtccgataccc
gtgaagctgccgctggtgtatttttatgggttaccggcctgcttggatggggatgggagt
tactataaggcgattgtatccaggttggcactggctgtgacgggcaggatggcagaggat
tcggatgcgagggaagctggtgtcattattgacacgcccggcatcattggccaagggaaa
ggtgcttctgaagacgttatacatcatattgtgaccgaattctcaatatccaccatcctt
gtcatcggttcagagcgcctttacagcaccatggtcaaaaactacgataacaaaccaatc
gccacgtcagcgacagcagctgcttctgatgagcgaatctcagtggtgaaactcaccaaa
tcgggcggttgcgtcgaccgtgatgcgacattcatgaaatatgttcgcgaatctcaaata
cggtcgtacttctttggaagtcctgtaccatcaactgcatcctcagcgctctcgctctcc
tccacaaccacaggcaccacgatgacgctttctccacacacctcgcaggtcgactttaac
agcttatctatatacagcatcaccatcgccacagaaggcgaagaagatgaatacgaccca
tcaaaattcgattcattcctgcccggcggacatgaagaaaacgatcataatacctctctc
acgggcacaacctcccttcaacccccatctggccttctcccaggcctccgatccgaactc
ccaagtgccaccacaggtttcccatccgcttctacaagttccactactccgtttacaaat
cttccttccccagcaccaatgtccctagcgaatacgttgttagcaatcaccaatgctgct
cccaacgcgtcattggacgaggtccgcgatgcgagtattatgggtttcatatacattgca
gatgtcgacgagaagaagggccaaggtggtaagttaaggctgctagcgccagtcggtggc
agggtgccgaatagggcgatgatctgggggagaaaatggcctggtgaggtggtaggattg
atcggatag
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