Cebus imitator (Panamanian white-faced capuchin): 108287252
Help
Entry
108287252 CDS
T08783
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04014
Ras signaling pathway
cimi04015
Rap1 signaling pathway
cimi04020
Calcium signaling pathway
cimi04024
cAMP signaling pathway
cimi04080
Neuroactive ligand-receptor interaction
cimi04713
Circadian entrainment
cimi04720
Long-term potentiation
cimi04724
Glutamatergic synapse
cimi05010
Alzheimer disease
cimi05014
Amyotrophic lateral sclerosis
cimi05016
Huntington disease
cimi05017
Spinocerebellar ataxia
cimi05020
Prion disease
cimi05022
Pathways of neurodegeneration - multiple diseases
cimi05030
Cocaine addiction
cimi05031
Amphetamine addiction
cimi05033
Nicotine addiction
cimi05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
108287252 (GRIN1)
04015 Rap1 signaling pathway
108287252 (GRIN1)
04020 Calcium signaling pathway
108287252 (GRIN1)
04024 cAMP signaling pathway
108287252 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108287252 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
108287252 (GRIN1)
04720 Long-term potentiation
108287252 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
108287252 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
108287252 (GRIN1)
05014 Amyotrophic lateral sclerosis
108287252 (GRIN1)
05016 Huntington disease
108287252 (GRIN1)
05017 Spinocerebellar ataxia
108287252 (GRIN1)
05020 Prion disease
108287252 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
108287252 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
108287252 (GRIN1)
05031 Amphetamine addiction
108287252 (GRIN1)
05033 Nicotine addiction
108287252 (GRIN1)
05034 Alcoholism
108287252 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cimi04040
]
108287252 (GRIN1)
Ion channels [BR:
cimi04040
]
Ligand-gated channels
Glutamate (ionotropic)
108287252 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
108287252
NCBI-ProteinID:
XP_017361011
Ensembl:
ENSCCAG00000021626
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MSTMRLLTLALLFSCSVARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEAKELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEDEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacgctcgccctgctcttctcctgctccgtcgcccgcgcc
gcgtgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggccgtgaaccaggccaacaagcgccacggctcctggaagatccagctc
aacgccacgtccgtcacgcacaagcccaacgccatccagatggctctgtcggtgtgcgag
gacctcatctccagccaggtctacgccatcctagttagccacccgccgaccccgaacgac
cacttcacccccacgcccgtctcctacacagccggcttctaccgcatccccgtgctgggg
ctgaccacccgcatgtccatctactccgacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtcgagcgtgtggttcgagatgatgcgagtctacagctgg
aaccacgtcatcctgctggtcagcgacgaccacgagggccgcgcggctcagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgaccca
gggaccaagaacgtgacggccctgctgatggaggcaaaagagctggaggcccgggtcatc
atcctctctgccagcgaggacgatgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctccgggtacgtgtggctggttggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatccttgggctgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgacgcggtgggcgtggtggcccaggcggtgcacgagctcctggagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagagtgctgatgtcttccaagtatgcggatggggtgactggccgcgtggag
ttcaatgaggacggggaccggaagttcgccaactacagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaacggcacccacgtcatccctaacgacaggaagatc
atctggccaggcggagagacagagaagcctcgagggtaccagatgtccaccagactgaag
attgtgacgatccaccaggagcctttcgtgtacgtcaagcccacgctgagcgacgggaca
tgcaaggaggagttcacagtcaatggcgacccggtcaagaaggtgatctgcaccggaccg
aacgacacgtcgccgggcagcccccgccacacggtgcctcagtgctgctacggcttctgc
atcgacctgctcatcaagctggcacggaccatgaacttcacctacgaggtgcacctggtg
gccgatggcaagttcggcacacaggagcgggtgaacaacagcaacaagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcagacatgatcgtggcgccgctgaccatc
aacaatgagcgcgcgcagtacatcgagttttccaagcccttcaagtaccagggcttgacc
attctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagccgttccag
agcacactgtggctgctggtggggctgtcggtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagccccttcggtcgattcaaggtgaacagtgaggatgaggaggaggac
gcactgaccctgtcctcggccatgtggttctcctggggcgtcctgctcaactccggcatc
ggggaaggcgcccccagaagcttctccgcgcgcatcctgggcatggtgtgggccggcttt
gccatgatcatcgtggcctcctacaccgccaacctggcggccttcctggtgctcgaccgg
cctgaggagcgcatcacgggcatcaacgaccctcggctgaggaacccctcggacaagttc
atctatgccaccgtgaagcagagctccgtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactatgagagtgcggcggaggccatccag
gccgtgagggacaacaagctgcacgccttcatctgggactctgcggtgctggagttcgag
gcctcacagaagtgtgacctggtgacgacgggagagctgttctttcgctccggcttcggc
atcggtatgcgcaaagacagcccctggaagcagaacgtgtccctgtccatcctcaagtcc
cacgagaatggcttcatggaagacctggacaagacgtgggttcggtatcaggaatgtgac
tcacgcagcaacgcccctgcgaccctcacttttgagaacatggcaggggtcttcatgctg
gtggctgggggcatcgtggccgggatcttcctgattttcattgagatcgcctacaagcgg
cacaaggacgcccgccggaagcagatgcagctggcttttgcagcagtgaacgtgtggaga
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagaggcgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
DBGET
integrated database retrieval system
