Cebus imitator (Panamanian white-faced capuchin): 108289097
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Entry
108289097 CDS
T08783
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cimi04040
]
108289097 (SCN11A)
Ion channels [BR:
cimi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108289097 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
108289097
NCBI-ProteinID:
XP_037587257
Ensembl:
ENSCCAG00000025119
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTGEVPQPRPQLDLKVSR
KLPKLYGNIPRDLIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRISVHSLFSMFIISTVIINCVFMASGLGKTSNSNDTDIAEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSLVIGTAMVSYWCIGINLLSLRTFRVLRALKAISVVSRLKV
IVGALLRSVKKLINVIILTLFCLSIFALVGQQLFMGSLNLKCVRSDCTNVSNKEAREYCF
EKKENSTEFRMCGTWMGNSSCSSQYECIHTRINPDYNYTNFDNFGWSFLAMFRLMTQDSW
EKLYQQTLRTTGPYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAEIEAKEKMF
QEAQQLLKEEKEALVAMGIDRSSLTSLETSHFSPKKRKLFGNKKKKSFFMREPGKDQPPG
SDSDEDSQKTPQLLEQTKRLSHNLSLDHFDEHGDPLQRQRALSAVSILTITMKEQEKSQE
PCFPCGENQASKYLMWNCCPQWVAIKKVLRIVMTDPFTELAITICIIINTVFLAMEHHKM
EPSFEKMLNTGNLVFTSIFLAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVLNGIF
QNKRWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLAIVIFIFSVAGMQ
LFGSSFNSQKSAKLCDPTDPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEAN
TSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFHWAF
CFVIHTLEHFFQKWCQRKKSPKQKEVTGGCAAQSKDVIPLVTETKRGSETQEELGILASV
PKTLGVGHDRTWLAPLAEEEDDVEFSGGDNARPITQPEAEQQARELHQETKKPISQRVRS
VEIDMFSEDEPHLTIQNPRKKSDATSMLSECSTIDLQDAFGGLPETVPKKEPERCLPKGL
GCCLPCCSIDKRKSPWVVWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLEQR
PKIQELLNCTDFIFTHIFVLEMVLKLVALGFGKYFTSAWCCLDFIIVIVSVTSLLNSNEL
KSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFSGK
FWRCINGTDSVINYTIVPNKNQCESGNFSWLNQKVNFDDVGNAYLALLQVATFKGWMDII
RAAVDSREKEEQPAFESSSLSYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDI
FMTEEQKKYYNAMKKLGSKKPLKPIPRPLNKCQGLVFDIVTSQIFDIIIIILIILNMITM
MAESYNQSKATESTLDRLNWIFVVIFTVECLIKIFALRQYYFTNGWNLFDCVVVVLSIVS
TMVSILAKQDHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLL
LFLVMFIYAILGMNWFSKVNPESGIDDIFNFQTFACSMLCLFQITTSAGWDALLGPMLRS
KKSCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDF
DIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHCL
DILFAFTTNVLGGSDVLDSMKTMMEDKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKA
FRKYMMKVTNSDLENRPHSSLQTLCNGDLSSSGVAKGKVHCD
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaattttcccagatgagcggaatttccgccccttcact
tctgactctctggccgcaattgagaagcggattgccatccaaaaggagaaaaagaagtct
aaggaccagacaggagaagtgccccagccccggcctcagcttgacctgaaggtctccagg
aagttgcccaagctctatggcaacattccccgtgatctcataggaaagcccctggaagac
ctggacccattctacagaaatcacaagacgtttatggtgttaaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttggacctttcaattcaatcagaagt
ttagccattagaatctcagtccattcattgttcagcatgttcattatcagcaccgttatc
atcaactgtgtgttcatggctagcgggcttggtaaaaccagcaacagcaacgatactgac
attgctgagtatgtcttcactgggatttatatttttgaagccttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
cttgtcattggaacagcgatggtgtcatactggtgcatcggcatcaacctgttgtccctg
cgcaccttccgtgtgttgagagctttgaaagcaatttcagtagtttcacgtctgaaggtc
atcgtgggagccttgctgcgctccgtgaagaagctgatcaatgtgattatcctcaccctc
ttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagtctgaacctg
aaatgcgtccggagcgactgtacaaacgtcagtaacaaggaagctcgtgaatattgcttt
gaaaagaaagaaaattcaactgaattcagaatgtgtggcacttggatgggtaacagttcc
tgttcctcacaatatgaatgtattcacaccagaattaatcctgactataattatacgaat
tttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgg
gagaagctctatcaacagaccctgcgtactactgggccctactcagtcttcttcttcatt
gtggtcatcttcctgggctccttctatctgattaacttaaccctggctgttgtcaccatg
gcgtatgaggagcagaacaggaatgtagctgcagagatagaggccaaggaaaagatgttt
caggaagcccagcagctgctaaaggaggaaaaagaggctctggttgccatgggaattgac
agaagttcacttacctcccttgaaacatcacatttttcccccaaaaagagaaagctcttt
ggtaataagaaaaagaagtccttctttatgagagagcctgggaaagaccagccaccaggg
tcagattctgatgaagattcccaaaaaacgccacagctcctggagcaaaccaaacgactg
tctcataatctgtcactggaccactttgatgagcacggagatcctctccaaaggcagcga
gcgctgagtgccgtgagcatcctcaccatcaccatgaaggaacaagaaaagtcacaagag
ccttgtttcccatgcggggaaaaccaggcatccaaatacctcatgtggaattgttgcccc
cagtgggttgccattaagaaggtcttgagaatcgtgatgaccgacccctttactgagctg
gccatcaccatctgcatcatcatcaatactgtcttcttggccatggagcatcacaagatg
gagcccagctttgagaagatgttgaatacagggaatttggttttcactagcattttttta
gcagaaatgtgcctaaaaatcattgccctcgatccctaccactactttcgccgaggctgg
aacatctttgacagcattgttgctcttctgagttttgcagacgtactgaacggtatattt
caaaataaaaggtggccattcttgcgctccttcagagtgctcagggtcttcaagttagcc
aaatcctggccaactttgaacacactaattaagataatcggcaactctgttggagccctt
ggaagcctgactgtggtcctggccattgtgatctttattttctcagtagctggcatgcag
ctttttggttctagcttcaactcccaaaagagtgcaaaattatgtgacccgacagacccg
acagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtggta
ttccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaagcgaac
acatcattgtgtgttattgtcttcatattgatcacggtgataggaaaacttgtggtgctc
aacctcttcattgctttactgcttaattcctttagcaatgaggaaagaaacggaaattta
gaaggagaggccaggaaaactaaagtccagttagcactggatcgattccactgggctttt
tgttttgtgatacacactcttgagcatttcttccaaaagtggtgccagaggaaaaagtca
ccaaagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagatgtcatccccctg
gtcacagagacgaaaaggggctcagagacacaggaggagcttggtattctagcctctgta
ccaaagaccttgggcgtcgggcatgatcggacttggttggctccacttgcagaggaggaa
gatgatgttgagttttctggtggagataatgcacggcccatcacacaacctgaggctgaa
caacaggcccgtgaactccatcaggagaccaagaagcccatcagccagagagttcgaagt
gtggaaattgacatgttctctgaagatgagcctcatctgaccatacagaatcctcgaaag
aagtctgatgctaccagtatgctatcagaatgtagcaccattgatcttcaggatgccttt
ggagggttacctgagacagttcccaaaaaggaaccagagagatgtttgcccaaaggcctt
ggttgctgccttccatgctgtagcatagacaagagaaagtctccctgggtcgtttggtgg
aacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagctttattatc
tttgtgattctgctgagcagtggggcactgatatttgaagatgttcaccttgagcaacga
cccaaaatccaagaattactaaattgtactgactttatttttacacatatttttgtcctg
gagatggtactaaaattggtagccttaggatttggaaagtatttcaccagtgcctggtgc
tgcctcgatttcatcattgtgattgtctctgtgaccagccttcttaactcaaacgaattg
aagtctttccggacactgcgagcactgaggcctcttcgcgcgctgtcccagtttgaagga
atgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaatgttttactt
gtctgcctcattttctggctcatattttgtatcctgggagtacacttcttttctggaaaa
ttttggagatgcattaatggaacagactcagttataaattataccatagtaccaaataaa
aatcaatgcgaaagtggcaatttctcttggctcaaccagaaagtcaactttgacgatgtg
ggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatggacattata
cgtgcagctgttgattccagagagaaagaagaacagccagcgtttgagagcagttcactc
agttacatttacttcgtagtctttatcatctttggctcattcttcaccctgaatctcttc
attggtgttattattgacaacttcaaccaacagcagaaaaagttaggtggtcaagacatt
tttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaa
cctttaaaacccattccacgacctctgaacaaatgtcaaggtctcgtatttgacatagtc
acaagtcagatctttgatatcatcatcataattctcattatcctaaacatgattaccatg
atggctgaatcgtacaaccagtccaaagctacggagtccacccttgaccgtctcaactgg
atctttgtggtcatctttacagtagaatgtctcatcaaaatctttgctttgaggcaatac
tacttcaccaatggctggaatttatttgattgtgtggtcgtggttctttctattgttagt
acaatggtttctatcttggcaaagcaggaccacattcctttccctccgacgctcttcaga
attgtccgcttggctcggatcggccgaatcctgagacttgtccgggctgcacgagggatc
aggactctcctctttgctctgatgatgtcgcttccttctctgttcaacattggtcttcta
ctctttctggttatgtttatctatgccattttgggtatgaactggttttccaaagtaaat
ccagagtctggaattgatgatatattcaacttccaaacttttgcctgcagcatgctctgt
ctcttccagataaccacatcagcaggttgggatgccctgctcggccccatgctgcgatca
aaaaaatcatgtaactcctcctcagaaaactgccatctccctggcatagccacatcctac
tttgtcagttacatcatcatctcctttctcattgttgtcaatatgtacattgctgtgatt
ttagagaacttcaatacagccactgaagaaagtgaggaccctttgggtgaagatgacttt
gacatattctatgaagtgtgggaaaagtttgacccagaagcaacacagtttatcaaatat
tctgccctttctgattttgctgatgccttgcctgagcctttgcgtgtggcaaagccaaat
aaatatcaatttctagtaatggacttgcccatggtgagtggagatcgcctccactgcctg
gatattcttttcgctttcaccactaatgtactcggtggctctgatgtcttggatagcatg
aaaacaatgatggaagataagtttatggaagccaatcctttcaagaagttgtatgaaccc
atagtcaccaccaccaagagaaaggaagaagaaagatgtgctgctgttattcaaaaggca
tttcgaaagtacatgatgaaggtgaccaacagtgacttggaaaacaggcctcattcatca
cttcagactctttgcaatggagacttgtccagctctggggtagccaagggcaaggtccac
tgtgactga
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integrated database retrieval system
