KEGG   Cebus imitator (Panamanian white-faced capuchin): 108293162
Entry
108293162         CDS       T08783                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03020  RNA polymerase
cimi03420  Nucleotide excision repair
cimi04623  Cytosolic DNA-sensing pathway
cimi05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108293162 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108293162 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108293162 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    108293162 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cimi03021]
    108293162 (POLR2E)
   03400 DNA repair and recombination proteins [BR:cimi03400]
    108293162 (POLR2E)
Transcription machinery [BR:cimi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108293162 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     108293162 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     108293162 (POLR2E)
DNA repair and recombination proteins [BR:cimi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108293162 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 108293162
NCBI-ProteinID: XP_017369952
Ensembl: ENSCCAG00000025658
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctctggaaaatccgcaagaccatcatgcagcta
tgccatgaccgtggctacttagtgacccaggacgagcttgaccagacactggaggagttc
aaagcccagtttggggacaagccgagcgaggggcggccgcgccgcactgacctcaccgtg
ctggtggcacacaacgatgaccccaccgaccagatgtttgtgttctttccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaggaggagaacatcacc
cgggccctcatcgtggtgcagcaggggatgacgccctccgccaagcagtccctggttgac
atggcgcccaagtacatcctggagcagtttctgcagcaggagctgctcatcaacatcaca
gagcacgagctggtccctgagcacgtcgtcatgaccaaggaggaagtgacggagctgctg
gcccgatataagctccgtgagaaccagctgcccaggatccaggcgggggaccccgtggct
cggtacttcgggataaagcgtggacaggtggtgaagatcatccggcccagcgagacggcc
ggcaggtacatcacctaccggctggtacagtag

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