Cebus imitator (Panamanian white-faced capuchin): 108309995
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Entry
108309995 CDS
T08783
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108309995 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108309995 (POLR1A)
Enzymes [BR:
cimi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108309995 (POLR1A)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108309995 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
FAM60A
Motif
Other DBs
NCBI-GeneID:
108309995
NCBI-ProteinID:
XP_017392106
Ensembl:
ENSCCAG00000019839
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRFLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLMVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENADPSASEIQEELEQYTTEIVQNNLLGSQGAH
VKNVCESRSKLIAFFWKTHMNPKRCPHCKTGRSVVRKEHNSKLTITFPAMVHGTAGQKDS
EPLGLEEGQMGKRGYLTPTSAREHLFALWKNEGFFLNYLFSGVDDDGMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIQKLLALMAQEQKLPGDVAVPAT
DEEKDSLIAIDRSFLSTLPGQSFIDKLYNIWIRLQSHVNIVFDSEMDKLMTDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSTVDVSQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLFPPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLTGKAKITGKAWVKET
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGEISGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQQIIEESIHCGPRAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDVPKTQFLQPKQFPFLASNYEAIMKSNHLHEVLSRADPKKALRHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIEAAVKALNLESGNRNGRSPGTQEMLRMWYELDEHSRRKYQKKAA
SCPDPSLSVWRPDIHFASVSETFETKVDDYSQEWAAQTERSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKRALKRVKSLKKHLTRVCLGEVLQIIDVQESLCIEEKQNKFRVYQLRFQ
FLPHACYQQEKCLRPEDILRFMETRFFKLLMESIRKKNNKASAFRNVNTRRATQRDLDNT
EESGRSRGEQEGDEEEEGHIVDAEADEGDADASDAKRKEKQEEEVDYESEEEEEKEGEEN
DDEDAQEEGNAHREGAQETQEQDEEMASGAEEAPSLPALLAQPRKSTHSQEPQGAEATKR
RVQAVLEIHSFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHDAIVYTTKGIT
RCLLNETTSSKNEKELVLNTEGINLPELFKYAEILDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagctcaagaaattaagtgttaaatctattacaaaccctcggttcctggac
agcctggggaacccatcggcaaacggcctgtatgatttagctttgggccccgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctccgggcacctgggccat
attgagctcccactcatggtgtacaaccctctcctctttgataagctatacctgctgctt
cgggggtcttgtttaaactgccacatgctgacttgtccccgggctgtgattcacctctta
ctctgccagctgagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaatgctgatccctctgcctctgaaattcaggaggaa
ttagaacaatacacaactgaaattgtgcagaacaacctcctggggtcccagggtgcccat
gtaaagaacgtgtgtgagagcaggagcaagctcattgctttcttctggaagacacatatg
aatcctaagcgctgtccccactgcaagactgggcgatctgttgtccgaaaggaacacaat
agcaagttgacgatcacgtttccagccatggtgcacgggacagctggccagaaggactcc
gagcccctgggacttgaggaaggtcagatgggaaaacgaggatacttaacacccaccagt
gcccgtgaacacctttttgccctgtggaagaatgaaggattttttctgaactaccttttt
tcgggagtggatgatgatggtatggagtccagattcaaccccagtgtgttctttctagat
ttcttggtggtgccgccctcaaggtatcgcccagtcagtcgcctgggagaccagatgttt
accaatggccagacagtgaacttgcaggctgtcatgaaggatgtagttctgattcaaaaa
cttctggcattgatggcccaagaacagaagctaccaggggatgtggcagtacccgctaca
gacgaggaaaaagactctttgattgctattgacagatccttcctgagtacacttccaggc
cagtccttcatagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagcgagatggacaaactaatgacagacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaagcacatgatgggaaagcgagtggactacgct
gcacgctcagtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtatttgccacaaaactgacctacccacagccagttaccccatggaatgttcaggaactt
agacaggcggtcatcaacggccccaacgtgcacccaggagcctccatggtcatcaatgag
gatggcagccgcacagccctgagcactgtggacgtgagccaacgagaggccgtggccaag
cagctactgaccccagccatgggggcacctaaaccccaaggaacaaaaattgtgtgccgg
catgtgaagaatggggacattctgctactgaaccgtcagcccaccctgcacagaccctcc
atccaggcccaccacgcccgcatcctgcctgaagagaaagtgctgcggctccactatgcc
aactgcaaagcctataatgctgactttgatggagatgagatgaatgcccatttcccccag
agtgagctgggccgggccgaggcctatgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccaaccattggcgggactgatccaggatcacatggtttcaggtgcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacggacaaagtggggcgcgtgaagctctttcctccttccatcctgaagccctttcca
ctctggacaggaaaacaggttgtgtcaacgctgctcataaatataatcccagaggaccac
atcccactgaacttaactggaaaggcaaaaatcactgggaaagcctgggtgaaggagact
cctcgatctgttcctggctttaaccccgactcgatgtgtgagtcccaggtgatcatcagg
gaaggggagctgctctgtggagttctggacaaggcgcactatgggagctccgcctacggc
ctggtccactgctgctatgagatctacgggggcgagatcagcggcaaggttctaacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacagatcattgaagaatccatc
cactgcgggccccgggctgtcagggctgcattaaacctgccagaagccgcatcatatgat
gaggtccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggtctacacagacagttcccagagaacagcctgcagatgatggtgcaatcg
ggagccaaaggttcaactgtgaacacgatgcagatctcatgcctgctgggccagattgaa
ttggaaggtcggagacccccgctgatggcgtctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggctggtggttttgtcactggcagattcctcactggcatcaaa
cctcctgagttcttcttccactgcatggcaggaagagagggcctggtcgacactgctgtg
aaaaccagccgctcaggctatctccagaggtgcatcatcaagcacctggaggggctggtc
gtgcagtatgatctcacggtccgagacagtgacggcagtgtggtacagttcctgtatggg
gaagatggcctagacgtccccaagacacagttcctgcagcccaagcagttccccttcctg
gccagcaactatgaggcgataatgaaatcaaatcatctccatgaagttttatccagagct
gatcccaaaaaagctctccgccacttcagagccatcaaaaaatggcaaagcaagcacccc
aacaccctgctgagaagaggtgcctttttgagttattcccaaaaaattgaggcagctgtg
aaagccctgaaccttgagagtggaaaccggaacggccgcagccccgggactcaggagatg
ctgaggatgtggtatgagttggatgagcacagccgaaggaaataccagaagaaggcggcc
agttgtcctgaccccagtctgtctgtctggcgccctgacatacactttgcatcagtgtca
gaaacatttgaaacaaaggttgatgactacagtcaagagtgggcagctcaaacagagaga
agttatgagaaatcagaactttctctcgacaggttgaggaccttgctgcagctgaagtgg
cagcgctcactgtgtgagccaggcgaggccgtgggcctgctggccgcccagagcatcgga
gagccctccacccagatgaccctcaacaccttccactttgcaggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagattctcatggtggccagcgccaacatcaag
acacccatgatgagtgtgcctgtgctcaacaccaagagagccctgaagagagtgaaaagc
ctgaagaagcatctcaccagagtgtgcttaggggaggtattacagataattgacgtccag
gagtccttatgtatagaagaaaaacagaacaaattccgggtgtaccagctgcggtttcag
tttctgccacatgcatgttaccagcaggagaagtgcctgagacccgaggacatcctgcgc
ttcatggaaacaagattctttaaacttctgatggaatccatcagaaagaagaataataaa
gcatcagctttcaggaacgtaaatactcgaagagctacgcagagggatctggacaacact
gaggagtccgggaggagtcggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggacgctgaagctgatgagggggatgccgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggttgattatgagagtgaggaagaggaggagaaggaaggcgaggagaat
gatgatgaggacgctcaggaggaagggaatgcccacagggaaggtgctcaagagacccaa
gagcaagacgaagaaatggcttcaggtgctgaggaggccccgtccctacccgccctcctg
gcacagccccggaaatccacccacagccaggagccccagggggccgaggccacgaagcgc
cgggtccaggctgtgcttgagatccactccttcatagaggactaccagtatgataccgag
gagagcctgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatg
agctccctggtagtatctttggcccatgatgccatcgtctatacaaccaagggcatcact
cggtgcctcctgaatgaaacgaccagcagtaagaacgagaaggagcttgtgctaaacaca
gagggaatcaaccttccagagctgttcaagtatgcagagatcctggatctgcgccgcctc
tattccaatgatatccacgccatggccaacacgtatggcatcgaggctgcactgcgggtg
atcgagaaagaaatcaaggatgtgtttgccgtgtatggcattgctgtcgaccctcgccat
ctctccctggtcgctgattatatgtgcttcgagggtgtttacaagccactgaatcgcttt
gggatccagtcaaactcttccccgctacagcagatgacatttgaaaccagcttccagttt
ctgaagcaggccaccatgctgggatcccatgatgagctgaggtctccttctgcctgcctt
gtggtcgggaaggtcgtcaagggtgggacaggcctgttcgagctcaagcagccgctgaga
tag
DBGET
integrated database retrieval system
