Cebus imitator (Panamanian white-faced capuchin): 108313602
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Entry
108313602 CDS
T08783
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04721
Synaptic vesicle cycle
cimi04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
108313602 (SLC6A4)
04721 Synaptic vesicle cycle
108313602 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cimi02000
]
108313602 (SLC6A4)
Transporters [BR:
cimi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108313602 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
108313602
NCBI-ProteinID:
XP_017397518
Ensembl:
ENSCCAG00000024873
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKQLSACKDGEDCQENGVLQKGVPTPGDKLESGQISNGYSAVPSPGAGDDTR
HPIQAAATTLVAELHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRRERFVLAVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSVILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLSAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaactctcagaaacagctatcagcatgtaaggatggagaagat
tgtcaggaaaacggagttctgcagaagggtgtccccaccccaggggacaaattggaatct
gggcaaatatctaatggatactcagcggttccaagccctggtgcgggagacgacacgagg
caccctatccaggcggccgccaccaccctagtggctgagcttcatcaaggggaacgggag
acctggggcaagaaggtggatttcctcctctcagtcattggctatgctgtggacctgggc
aacgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctcctcccc
tacaccatcatggccgttttcgggggcatcccgctattttacatggagctcgcgctggga
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
attggctacgccatctgcatcattgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaattacttctctgaggacaacatcacctgg
accctccattccacgtcccctgctgaagaattttacacgcgccacgttctgcagatccac
cggtctaaggggctccaggacctggggggcatcagctggcagctgaccctctgcatcatg
ctgatcttcactgttatctacttcagcatctggaaaggcgtcaagacctctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtgaggggtgcc
accctccctggagcctggaggggtgttctcttctacttgaaacctaactggcagaaactc
ctggagaccggggtgtggatagatgctgccgctcagatcttcttctctcttggtccgggc
tttggggtccttctggcttttgctagctacaacaagttcaacaacaactgctaccaagat
gcgctggtgaccagcgtggtgaactgcatgacgagcttcgtttcgggatttgtcatcttc
acggtgctcggctacatggctgagatgaggaatgaagatgtgtctgaggtggccaaagat
gcaggtcccagcctcctcttcatcacctatgcagaagcgatagccaacatgccagcgtcc
actttctttgccatcatcttctttctgatgctgatcacgctgggcttagacagcacgttt
gcaggcttggagggggtgatcacagctgtgctggatgagttcccacacatctgggccaag
cgccgggagcggtttgtgctcgccgtggtcatcacctgcttctttggatccctggtcacc
ctgacatttggaggggcctacgtggtgaagctgctggaggagtatgccaccgggcccgca
gtgctcactgtggccctgatcgaggcagttgctgtgtcttggttctacggcatcactcag
ttctgcagggacgtgaaggaaatgctcggcttcagcccggggtggttctggaggatctgc
tgggtggccatcagccctctgtttctcctgttcatcatttgcagttttctgatgagccca
ccacagctacgacttttccaatataattatccccactggagtgtcatcttgggttactgc
ataggaacttcatctttcatctgcatccccacatacattgcttatcggctgatcatcact
ccagggacatttaaggagcgtattattaaaagtatcaccccagaaacaccaacagaaatt
ccttgtggggacatccgcttgagcgctgtgtaa
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