Ciona intestinalis (yellow sea squirt): 100175199
Help
Entry
100175199 CDS
T01056
Name
(RefSeq) acyl-CoA synthetase family member 3, mitochondrial isoform X1
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00061
Fatty acid biosynthesis
cin00280
Valine, leucine and isoleucine degradation
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
100175199
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100175199
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
100175199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100175199
NCBI-ProteinID:
XP_002128637
LinkDB
All DBs
Position
2:2384327..2388725
Genome browser
AA seq
564 aa
AA seq
DB search
MLRFVFLHHHVLRNCAIIQNSMRCISPLHSKHRFLHLSPIKRKISIHDQHGNWSWENITT
RSTFLKSELLKSEASKNTKNLNGERVCFLTPNDSSFVSCLLAVWSCGGIAVPLCSKHPPS
ELEYVINHSRASTVVSAVKYTTMIGPLCEKLKVEHVQLDHWDKLDGDAKPCVENFPLLHV
DQGHNHSLIMYTSGTTGPPKGVLFNHSNIRYQIKSLVDIWEMSSSDVLLHVLPLHHIHGF
INALLCPLSINAAVVMEPSFEAGRVWKHLLGESCSNFPRVNVFMAVPTIYTKLIQYFDEH
QMCVEETKKKCKDIRLMVSGSASLPLSIMQKWKSITGHTLLERYGMTEFGMGLTNPYKGK
RIPGYVGLPFPNVEAKIAASQENGEPDYSRYNVLYKDNRVFETEGTSDESGELLIKSKSI
FQKYWNNNKATKESFVDGWFKTGDIAVFEDGMFRIVGRSSVDIIKSGGFKLSALDVERVL
LEHDHVEEASVLGVPDDTWGQKVVAVIKLTQNSTVDDVTMTSWCREHMARYRIPREFKFV
KEIPRNAMGKVNKKTLLQSIESKS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtttcgtgtttttacatcatcatgttttaagaaattgtgccataattcaaaat
tcaatgagatgtataagcccacttcattcaaagcatcgttttcttcatttaagccctata
aagcgtaagattagcatacacgatcaacatggcaattggagttgggaaaatataaccacc
aggagtacgtttttaaaaagtgagcttcttaaaagtgaagcatcaaagaacacaaaaaat
cttaatggtgaaagggtttgcttcctaacaccaaacgacagcagttttgtgtcgtgtttg
cttgctgtatggtcatgtgggggcattgctgtcccattatgttcaaagcatccaccatct
gagttggaatatgtgattaaccattcaagagcatctactgtggtttcagctgttaaatat
acaacgatgattggaccattatgtgaaaagctgaaagttgagcatgttcagcttgatcat
tgggataagttggatggagatgcaaagccatgtgtagaaaactttcctttacttcatgtt
gatcaaggtcacaatcattcacttatcatgtacacaagtggaactactggcccacctaag
ggagttctgtttaatcattcaaacattagatatcagataaagagtcttgttgatatttgg
gagatgtcgtcctcagatgttttgcttcatgtccttccactacaccacatacatggcttt
atcaatgcactgctttgtccattatcaatcaatgctgctgtggtaatggaaccaagtttt
gaagctggaagggtctggaaacatttgttgggtgaaagttgtagcaattttcccagagtg
aatgttttcatggctgtaccgacaatatatacgaagcttatccaatattttgatgagcac
cagatgtgtgttgaggaaacaaaaaagaaatgcaaagatattcgtctcatggtttctggt
tctgcctcccttcccctatccatcatgcaaaagtggaaatctattactggccacacttta
ttggagagatatggaatgacagagtttggcatggggcttactaatccatacaaaggaaaa
cgaataccaggttatgttgggttaccgttcccaaatgttgaagcgaaaattgccgcatct
caagaaaatggagaaccagattactcgaggtacaacgtgctttacaaagataacagagtg
tttgaaacagaaggaacttccgatgaatctggtgaacttctaataaaatcaaagtccata
ttccaaaaatattggaataataataaagctacaaaggaaagctttgttgacggttggttt
aagactggagacatagctgttttcgaagatggtatgtttcgtatcgttggtcgttcatca
gttgatattattaaaagtgggggttttaaactaagtgcgttggatgtagagcgagtgctg
ttggagcatgaccatgtagaggaggcatcagttttaggggtacctgatgatacctggggt
caaaaagttgttgctgtaattaaacttacacaaaattccactgtcgatgacgtcacaatg
acgtcatggtgtcgtgagcacatggcaaggtacaggataccaagagagttcaagtttgta
aaggaaattccacggaacgcaatgggcaaagttaacaagaaaactttactacaaagtatt
gaaagcaaatcatga
DBGET
integrated database retrieval system