Ciona intestinalis (yellow sea squirt): 100176198
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Entry
100176198 CDS
T01056
Name
(RefSeq) allene oxide synthase-lipoxygenase protein-like
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00590
Arachidonic acid metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
100176198
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100176198
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
100176198
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GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
100176198
NCBI-ProteinID:
XP_002122603
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Position
14:3697162..3706462
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AA seq
687 aa
AA seq
DB search
MGNCFKSVKVLPYPTTQYKVSVKTTDGYHKAGTDSTIYLELVGTDGMSTDWVKLDNFLKD
DFEKGQENHFEFLSRDIGAPIIIRIKLEDTGDEDEWLCSHITVTYMDNKIEFPVYEWIEK
KIQFTTGKAMLPQKVDNPHVRSLRHQEIDRRKGLYLWVDLPTEAQIGFGLPRYVNVDSYA
KLPKIFQRSEIRQAQFAEKRLEALFQVTLNVIGTAICPIEDFDSFKKLYRLDEIKWQDPD
YINNWDTDIGMGRQVLTGISPLAFEKYTKPIPNFDVTNDDVSDLLEGRTLEEAMQAGKLY
VGDYSKLLADVERRTYNDEPLHCANSIGLFYVNTEGQFLPIAIQLVAGDRDYLFTPSCNH
YDWLLAKMYFRCSHSNVHQWVYHYLYTHAIIEPFTIALFRCLPSAHPIYKLLRPHLRTVV
AINTEARLVLIPPNARGGQSMAIMAAALARKQFKTFHFDDIVIPKVLKKLGTDDSELLPN
FYYRDDALALWSIMEKYVESVVRFYYTSDEDVKEDFELQGWAKDVAEHGLGWQDGNTRGF
PTSITNIEQLIEICVTLMFTSSAQHAAVNFGQFETYKFIPNATVGMRQPPHKKGEATLER
VLESLPDATLASLHIAVSYTLSQFSPDEAYLGTFAERLFTETEITSIQENYRQDLAGLEQ
KIVQRNEGLEYEYSYLQPSRVPESIAI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattgcttcaaatctgttaaagtgcttccgtatccaacaactcagtataaagtt
tctgtaaagactaccgatggctatcacaaggcaggtacagattcaacaatctatcttgaa
ttggtggggaccgacggaatgtcaactgactgggtaaagctggacaactttcttaaggat
gattttgaaaagggacaagaaaaccatttcgagtttttgtcacgtgacatcggcgcacca
atcataatcaggattaaactggaagatacgggcgatgaagacgagtggttgtgcagtcat
atcactgtgacttacatggataacaaaatagaattcccagtgtatgaatggattgagaaa
aagatacagttcaccactggcaaagccatgctaccgcagaaagttgacaaccctcatgtt
cgctcactacgtcatcaagaaattgaccgacgtaaaggcctttacctttgggtggacttg
ccaacggaggctcaaattggatttggtttgccgcgttacgtcaatgtcgattcttatgca
aaactcccaaagattttccagagaagcgaaatacgacaagcgcagtttgctgagaaaaga
ctagaggcgttatttcaagtcactcttaacgttattggaactgcaatttgtccaattgaa
gattttgattcttttaaaaagttgtacagacttgacgaaataaaatggcaagacccagac
tacattaacaattgggacactgatattggaatgggccggcaagttcttactggtatcagt
ccattagcctttgaaaaatacaccaaacctatcccaaattttgacgtcactaacgatgac
gtcagtgatcttctagagggaagaactttagaggaagctatgcaggctgggaaactttac
gttggcgattacagcaaacttcttgctgatgtagagcgtaggacatacaacgacgaacct
cttcattgcgcaaactctatcgggcttttctacgtaaatacagaaggccagtttcttccc
attgccattcaactggtagctggtgatcgagattacttattcactccctcttgtaaccat
tacgattggcttttggctaagatgtacttcagatgttcacactcaaatgtgcatcagtgg
gtataccattacttgtacactcacgccatcattgagcctttcaccattgccctcttccga
tgcctgccttccgctcatccgatctataagctcctccgtccccacttacgtactgtggta
gcaatcaacacagaggcacgtttagtgttgattcctccgaatgctcgcggtggtcaatca
atggctataatggctgctgcgcttgcccgtaaacaatttaaaacatttcactttgacgac
atcgtaatacccaaggtcttaaagaaacttggtacggacgactcggagctgttgcccaac
ttttactatagggacgacgctctggctctttggtctattatggaaaaatacgttgaaagt
gtagtacggttttattacacttcggatgaggacgtcaaagaagactttgagttacaaggt
tgggcaaaagacgtcgcagagcatgggttaggctggcaagatggtaataccagaggcttc
ccgacttctattacaaatattgaacaattgatcgaaatttgtgtgacactcatgttcact
agttctgcacagcatgcagctgtaaacttcgggcagtttgaaacttacaagtttattcca
aatgcgaccgtcggcatgaggcagccacctcacaagaaaggagaagcaacacttgaaagg
gtactagagtctctaccggacgcaacgttggctagtcttcatatcgcggtttcttacacc
ctttcgcagttttcacctgacgaggcttaccttgggacttttgccgagcgacttttcacc
gaaacagaaataacatccattcaggagaattaccggcaggaccttgctgggttggagcag
aagatagttcaacgaaatgagggtcttgaatatgaatactcatatttacaaccatcacgc
gttccagagagtatagcgatttaa
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