Ciona intestinalis (yellow sea squirt): 100176842
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Entry
100176842 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100176842 isoform X2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00750
Vitamin B6 metabolism
cin01100
Metabolic pathways
cin01240
Biosynthesis of cofactors
Module
cin_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
100176842
Enzymes [BR:
cin01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
100176842
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Gene cluster
GFIT
Motif
Pfam:
SNO
GATase_3
GATase
Peptidase_S51
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
100176842
NCBI-ProteinID:
XP_002121359
Ensembl:
ENSCING00000006260
UniProt:
F6VPU4
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Position
12:complement(2523159..2526514)
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AA seq
222 aa
AA seq
DB search
MTQQRIHIGVLAVQGNFAEHKASFQQAIVKLKTTDFPYKVEISEIRRTEEIDDALDGLVI
PGGETPTMTVALRRNGFFEKLKAWTQRKDKYTWGTCAGLILLSNKLDGDGKGEVIPIGGL
DITCRRNAKGRQFESFEESIRLTDHELCALNRSENFHGIFIRAPGIKSVDDVGTDVLCVL
PGNGEVVGVRKGNLMGCTFHPELTGDSMWHEYFIKMVGSRKS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcagagaatacacatcggggttctagctgtacaaggaaacttcgcagaacat
aaagcttcatttcagcaagcaatcgtaaagctgaaaactacggactttccgtataaagtc
gaaatatctgaaatacgcagaactgaagagattgatgacgcattagatggtttggttatc
cccggcggggaaaccccaacaatgacagtggctttgcggagaaacggattctttgaaaaa
ctgaaagcatggacgcagagaaaggataagtacacgtggggaacatgcgctggattgatt
ctgttgtcgaataaattggacggagacggtaaaggcgaagttatcccgattggaggacta
gacatcacttgtcggaggaacgcgaaaggaagacagtttgaaagttttgaggagtcgata
cgcttgactgaccacgagctgtgcgcgctcaaccgtagcgagaacttccacggaatattc
atccgcgcgcctgggatcaaatcggttgatgacgtaggcactgacgtattatgtgtactt
cctggcaatggtgaggtagtgggggtaaggaagggtaacctcatgggttgcacttttcac
cctgagctcactggcgactccatgtggcatgaatactttataaagatggtgggaagcaga
aaatcttag
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