Ciona intestinalis (yellow sea squirt): 100177718
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Entry
100177718 CDS
T01056
Name
(RefSeq) peroxisomal sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00260
Glycine, serine and threonine metabolism
cin00310
Lysine degradation
cin01100
Metabolic pathways
cin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100177718
00310 Lysine degradation
100177718
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100177718
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
100177718
1.5.3.7 L-pipecolate oxidase
100177718
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
Folliculin_C
GIDA
Amino_oxidase
FAD_binding_2
MurD-like_N
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
100177718
NCBI-ProteinID:
XP_009860715
Ensembl:
ENSCING00000014735
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All DBs
Position
14:545346..549605
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AA seq
395 aa
AA seq
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MKTDYDVIVIGGGVEGLSTARYLAKQSCRSLLLEQFLVPNNRGSSGGFSRTIRHSYNTLQ
HALMMPSSFKEWRELEKECNKKLLINTGVLSMCSNDNQKEIQANLKQIGIDYTFYKSEEI
AKVFPGLNGGEYNAIYEREACIMKSDECLRCLRDSYISSGGTLLELQRVIAINPINEHRV
EVRTPENVFVAESVVLTCGAWTNKMLKPLGLKLPLKVQKTDAFYWKTKDEKMFSASNGFP
VSCVMKNDGNLCYSLSSFKYPGLVKVALHKGIEVDEDNRDAPLSQEQRQAWKKDFKELTT
FVKEHYPGLEPVPSIHEACLYTMTPDEDFILDSHPSHRNIIIGAGFSGHGFKMGPVVGEI
LGSLALKRKPKVDTHSFLISRFSASSMDKIPQGKL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggattatgatgtcatagttattggtgggggtgtggaagggctttcaacagca
aggtatttagcaaaacaaagctgcagaagtttgttgttggaacagtttttggtcccaaac
aaccgagggagttctggtggtttttcgcgtacgatcagacacagttataacacgttacaa
catgcactgatgatgccaagtagtttcaaagagtggagagagttagagaaagaatgcaat
aagaaactgctaataaacacaggcgtcttgtccatgtgcagcaatgataatcaaaaagaa
attcaagctaatttgaaacagattggaatcgactatacgttttataaaagcgaagagatt
gcaaaagtatttcctgggttaaacggtggagaatataatgctatctatgaacgcgaggct
tgcatcatgaaatcggatgaatgtctacgctgtttacgggattcttacatttcttctgga
gggactcttcttgagctacaaagagtcatagcaataaatccaatcaacgaacacagagtt
gaagttaggaccccggaaaatgtgttcgttgccgagtcggttgttttaacatgcggtgca
tggacgaacaaaatgttgaaaccattgggtttaaaactgcctttaaaggtgcagaaaact
gatgcattttactggaaaacaaaagatgagaaaatgttttcagcgagtaatggtttcccg
gtttcttgcgttatgaaaaacgatggcaatttatgttacagtttgtcaagttttaagtac
cccggattagttaaggtcgctttgcataaaggcatagaagtggacgaggataacagagat
gctcctttgagccaggagcaacgacaagcttggaaaaaagactttaaagagctaacaacg
tttgtaaaagaacattatcctggcttggaaccagtcccatctattcacgaagcttgtcta
tatacaatgacaccagacgaagacttcattttggacagtcatccgtctcacagaaatatt
ataataggagctggattttcaggacatggatttaagatggggccagttgttggagagata
ttgggatctctggctttgaaaagaaaacctaaagtcgacacacattcatttttaatttca
agattcagtgcttcttcaatggataaaataccacagggcaaattgtag
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