Ciona intestinalis (yellow sea squirt): 100178620
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Entry
100178620 CDS
T01056
Name
(RefSeq) melatonin receptor type 1B-like
KO
K04285
melatonin receptor type 1A
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100178620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cin04030
]
100178620
G protein-coupled receptors [BR:
cin04030
]
Rhodopsin family
Others
Melatonin
100178620
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7tm_4
DUF5337
Motif
Other DBs
NCBI-GeneID:
100178620
NCBI-ProteinID:
XP_009860278
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Position
11:4441774..4447568
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AA seq
370 aa
AA seq
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MDNLLNATVGPNLSATTATPNPWYGIYGFQRTIEIVYLVCIILLGTLGNMLVICSIKSAS
RTHVSGNIFIVNLAVADLLVTAVLVPCVLANVIATENTLPNFACRVVAFLMSTACACSIH
SLAAIAINRYWAIVRPCSYPRVFSKKNTRIMVCGIWVWTCIPFVPAIMLAEQPYDYMIME
CLWDDKFSNSYTISLVALLMVVPFIVICLCYERLYHIVKKRSKWLMAQGSLENNTTMTEA
ALDRDIRLLKTVAVIITAYMLFWMPYGVMIIAGKLYIPPVAKKIIGWMAFSNSAVNFIIY
GVMNKSSRENYKHFLIRLLRGEFCGKAKPPTPNISVYTMNSPAGQRKFNTQATMVESRRE
KQLVHKLNVV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggataatttattaaacgcaacagtaggccctaacttaagtgcaacaaccgccaccccc
aacccatggtatggaatatacgggttccaacgaacaatagaaatcgtatatcttgtgtgc
attatattgctcggtacacttggtaatatgcttgtgatttgttcaattaaatcggcgagc
cggacgcacgtcagtgggaacatcttcatcgtgaatcttgctgtcgctgatttattggta
acagccgtactggtaccttgtgtattggccaacgtcatcgccaccgaaaatactctgccc
aacttcgcttgtcgtgtggttgcgttcctaatgtcgacagcttgtgcttgttcaatacac
agtcttgcagcaatcgcaataaacaggtattgggcgatcgttcgtccgtgttcgtacccg
cgtgtcttttcaaagaagaacacccgtatcatggtatgcggaatatgggtgtggacttgc
attcctttcgttcctgctataatgctagctgaacaaccgtatgattacatgataatggaa
tgcttatgggacgacaagttctccaactcctacacaataagcctggttgctctcttgatg
gtcgtaccctttatcgttatttgtctctgctatgaaagactataccacatcgttaaaaag
agatcaaaatggttaatggcacaaggatcgttggaaaacaatacgactatgacggaggct
gcgctcgatcgagatatacggttgctgaaaaccgttgcagtaattataaccgcgtacatg
ttgttttggatgccgtacggtgtgatgatcatagcaggcaaattatatattccaccggtg
gctaaaaagataataggctggatggcgttctcaaactctgctgtcaactttataatatac
ggtgtcatgaacaaatcttcacgggagaattataaacatttccttattcgtttgttacga
ggggaattctgcgggaaagcaaagccccccacaccaaacattagcgtatatacgatgaac
agtccagcagggcaacggaagtttaacacacaagctactatggttgaatctcgacgcgaa
aaacaacttgttcataaactgaacgtggtataa
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