Ciona intestinalis (yellow sea squirt): 100178679
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Entry
100178679 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 1-like
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178679
Membrane trafficking [BR:
cin04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
100178679
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100178679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
SH3_9
FCH
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
100178679
NCBI-ProteinID:
XP_026694183
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MNTKKDKQPLAECDAKIKEIRLQLNEQLKCLDQHTESRTTLLNDMQEFFKRKSEIDSEYA
RKLDILSEKYLTKQRNLYAIKKEQPDLDLQSPVLCWFQMLEQCQRESKDHQSLSNIYANH
FIPRLQIVVEDAIRLHKKTREIALCSHEDLLKDLRKLYQSMQLYQVYYTEYVQAESKLRV
AEKQFDKRNEKTLENSPKTGTTKSERSTFVPKLEKLKEKRQLKYSESNLKSVKARNEYIL
QLEATNAAIKKYYGVDIDNLLDTMGMGYHKSLERAWGSFISAEVAAQDSKMTGVGLLKKT
VQELDHDKDKKRCMENNVNAFATPPEFIMMTHSSDDVAKVSLALPQLHREIDKRCSEMER
TVQQMLTDEDELLPIVHAGMKLAKSHSQTRSPFFEGRCSYDTHTNINDASTNINAVDYYI
EIPIAETSTFTSKSGPPTVLRKPKKKFIRRKRAKHSQVNIACHFSTDLQAYLKESGRSIP
LVVESCIRILNLYGLHHQGIFRVPGSHQEITEMKRLFEAGEDPVSEREDEVDINSVAGLL
KLYFRQLDEKLFPRYIFDDIVQCAHISDMEDRVVKIRKIILNIPESVLIVMRYLFAFLNH
LSQNSDENMMDAYNIAVCFGPTLLPVPDNYDQVTCQANVNEIIKTIVVNHEAIFPDKMDG
PEYEKVMTSDEFAPDDPGDTMATEVDQSAADHHSASAHSSVSDDESEQFLEAMAKYDYKG
RSDRELSFLKGDCVTLYHRASDDWWEGSFKGKDGLVPHAYIVVQEYIDGISDVLSSCNES
EVSLDSGGTPQSPAHKSSQFFNPSNNRRMSSETSRPADQSRLPMKTKSLDRCNNAQEYIR
QQKAKAKIGLVPTIESPGKVQRSGSMRYEKPPPAELDQQPSVAENDPASLSVADRIERFR
KSTSSTKIDPDALQRRPYGSIPCIVLYEGQRKQDIDETMRQAMDQLQTLDMHGPQSXKAT
PDVGLDTLENRIGQRSESTTESRSSTLSSTDSRRSEKQTTPSPQSSGNWKSHMKSTSVGA
YDAKKSFIGKHSKNNNNNNGNSHYQVPTHRYQGMAAMAGRDFSTSAPAPPRANAFEPIRS
GMPFQQKNQPLKQSVRKTAL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaagaaggataaacagcctctggcagaatgtgatgcaaagataaaagaaatc
cgacttcagttgaatgagcagctgaaatgtctcgaccaacacacagagtcacgaaccact
ttgctcaatgatatgcaagaatttttcaaacggaaatctgaaatagattcagaatacgct
cggaaactggatattttatctgagaagtatctcacaaagcaaagaaacttatacgctata
aagaaagagcagccagaccttgacctgcaatcacccgtattatgttggtttcaaatgctt
gaacaatgccagcgtgaaagcaaagatcatcaatcattatcaaacatatatgctaatcac
tttattccaaggttgcagattgtagttgaagatgccataagacttcacaaaaaaacacgt
gagatcgctctatgctcgcatgaagatttacttaaagatcttcgtaagctgtatcagtcc
atgcagctatatcaagtgtattatactgagtatgtacaagctgaaagcaagttacgagtt
gcggaaaaacagtttgacaaaaggaatgagaaaactttagaaaactccccgaaaactggg
acaacaaagtcagaaaggtctacnttcgttccgaaattggaaaaattaaaagaaaaaaga
caactcaagtactctgagagcaatctcaaatctgtgaaagcacgtaatgaatacatactt
caactagaagctacaaatgctgctatcaagaaatattatggagtagatatcgacaacttg
ttagatacgatgggcatggggtaccacaagtcacttgagcgagcatggggttcatttata
tcagctgaagttgccgcacaagactccaaaatgactggcgttggcttgctgaagaaaact
gtacaagaactggaccatgataaggacaagaaaagatgtatggaaaacaatgtgaatgca
ttcgccacgccacctgagtttataatgatgacacacagcagtgatgatgtggccaaagta
tcgcttgctcttcctcagctgcatcgggagattgacaaaagatgtagtgagatggagagg
acagtacaacaaatgctcacggatgaagatgagctgctgcctattgttcatgcgggtatg
aaactggcaaaatcacacagtcaaactcgttcgccgttctttgaaggacgttgttcgtac
gatacgcacacgaacattaatgacgcctcaacaaacatcaatgctgttgattattacata
gaaatccctatagctgaaactagcacatttacaagtaaatctggtccaccaactgtactt
cgtaagcccaaaaaaaagtttattcgtcgcaagagagctaaacactcacaagtcaacata
gcatgccactttagcaccgacctgcaagcttatttaaaggaatctggtcgatccattccg
ctcgtagttgaaagttgtattcgtattttgaacttgtatgggttacatcatcaaggcata
ttccgtgtccctggttcccatcaggaaataacggaaatgaagcgactttttgaggctggt
gaagacccagtcagtgaaagagaggatgaagtagatatcaactcagttgcaggattgctt
aaactttacttccgacaactggatgagaaactttttccgagatatatttttgatgatatt
gttcagtgtgcacatatatcggacatggaagatcgtgttgtgaaaatcaggaagattatt
ctcaacatccctgagtccgtgctcatcgtgatgagatatctcttcgcgtttcttaaccat
ttatcgcagaacagcgacgaaaacatgatggacgcatacaacatagctgtctgctttggt
cccactctgttaccagtaccagataactatgaccaagtcacttgccaagctaatgttaat
gaaatcataaagacgatagtagtaaaccatgaagctatcttccctgataaaatggatgga
ccggaatatgaaaaggtcatgacctctgacgagtttgcccccgacgaccccggtgatacc
atggcaactgaagtcgaccaatcagctgccgatcatcacagcgcttcagcacactctagt
gtcagcgatgacgaatctgagcagtttttggaagcgatggcaaagtatgattataaaggt
cgttcagatcgtgagttgtctttcttaaaaggtgattgcgtcactttgtaccatcgtgcg
tctgatgactggtgggaaggaagttttaaaggaaaagatggtcttgtaccccatgcttat
atcgttgtacaagagtatatagatggtatatctgacgtattatcaagttgcaatgaatca
gaagtgagtctcgatagtggtggaacccctcaatcacctgcgcacaaaagctcacaattt
tttaacccatcaaataacaggagaatgagcagtgaaacatctcgtccagctgaccaatca
cgtttgccgatgaaaacgaagtcgttggaccgttgcaacaacgcacaagaatacattcga
caacaaaaagccaaagctaaaataggcttggtacctacaattgaatcacctggcaaagtt
caacggtccggcagcatgaggtatgaaaaacctccgcccgctgagcttgatcaacaaccc
agtgttgccgaaaatgatcccgcaagcctcagtgttgccgacagaattgagcgttttcgt
aaaagcacaagctcaacaaaaattgatccagatgcgttacaaaggcgtccctacggcagc
ataccatgtattgtgctttatgagggccaacgcaaacaagatattgatgagacaatgaga
caagcaatggaccagctgcaaacattggacatgcatggtccacagtctnataaagcaact
ccagatgtgggattagacacactggagaacagaataggccagcgcagtgaatcaacaact
gaatcacggagtagtacactctcttccacggacagcagacgtagcgagaaacagacaacg
ccgtcgccgcagtcaagtggaaattggaaaagccacatgaaaagtacctcagttggtgca
tatgacgcaaaaaaatcatttatcggaaagcattcgaaaaataataacaataataatgga
aattctcattaccaagtaccaacacatcgttatcaaggcatggctgccatggctggtcgc
gattttagtacatctgcccctgcacccccccgagcaaatgcatttgaacccatacgttca
ggcatgcctttccaacagaaaaatcaacccttgaaacaaagcgtgaggaaaactgctttg
taa
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