Ciona intestinalis (yellow sea squirt): 100179395
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Entry
100179395 CDS
T01056
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100179395
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cin01004
]
100179395
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100179395
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
100179395
Lipid biosynthesis proteins [BR:
cin01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
100179395
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
100179395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100179395
NCBI-ProteinID:
XP_018668291
Ensembl:
ENSCING00000004423
LinkDB
All DBs
Position
8:2170443..2180738
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AA seq
591 aa
AA seq
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MSYLKIGIAVAILLVLLKWLIPKWLFEDLRYLRIIMSAKKSGDLKVKNNLTFSKLLSINA
KKYPTKVYLYYEDETYTFAQMDALVNRVARSLISLGVGQGDQVALYMYSEPMYLAIVFAS
IRLGAEIGLINSNLKKSPLSHSLKMVEAKFLLVGNDSNLEQAVENIRPSIPDTKIIFCGD
STNETSFLSTVEKASPLKLEEKYLPTNISMSDTACYIFTSGTTGLPKAVTMSHAKVVRIS
EVCVFVNMSPDDILYTALPLYHTAGLLAACMCAVNIGCSVVLRRKFSASNLLSDCRKYKV
TMLQYIGELIRYLCSQPPSPHDKDHSIRMAYGNGMRADVWNKFIERFGKKIKIREFYAAT
EGNCGFINMFDEVGYVGTCSPLMKWCVEVPLNQPGLCITKVTKLAQYQPYKGDPKMTERK
LLRNVFKPGDEYYISGDLLLRDDQYRLAFFDRVGDTFRWKGENVSTNEVSDTVVLAGGIK
ESNVYGVEIPGCDGRAGMATIVIDEEIFSFESLYRFLDDVLPKYAVPVFIRTSSELQLTS
TLKQQKTSLKDEAYDLTRVTDPIYIINRKQATYTLLTPELLQQIKNRELRF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagttacctaaaaattggaatagctgtcgccatcttacttgtcttattaaaatggttg
ataccaaaatggttgtttgaagatctgagatatcttcgaattattatgagcgcaaagaaa
agtggagacctcaaagtaaaaaacaaccttactttttcaaaattattatcaataaatgcg
aaaaagtatccaacgaaggtttatctttattatgaagatgaaacttatacttttgctcaa
atggatgctctggttaacagagttgcaagatcattaatttcacttggtgtcgggcaagga
gatcaggttgctttgtacatgtatagtgaacccatgtacctggctatagtatttgcttcc
attcgccttggtgccgagataggactaatcaacagtaacttaaagaagtcaccattaagc
cacagtttaaaaatggttgaagcaaaatttctccttgttggaaatgattccaacctagaa
caggcagttgaaaatataagaccaagtattcctgacacaaaaattattttctgtggtgat
tctaccaatgaaaccagtttcctttcaactgttgaaaaagcatctccattaaaattagaa
gagaagtatctgcctactaatatttcaatgagtgatactgcatgttatatattcacatct
ggaactacaggtctcccaaaagcagttaccatgtcgcatgcaaaggtggttcggatatca
gaagtttgtgtattcgtaaacatgtctccagatgatatattatacactgccttacctctg
taccacacagcagggctcctagctgcttgtatgtgtgctgtgaatataggatgttcggtg
gttttgcggagaaagttttctgctagtaatttgctgagtgattgtcgcaaatataaagtc
accatgctgcagtacattggagaactgatcagatacttgtgcagccagccaccgtctcct
catgataaagaccatagcattcgcatggcatacggtaacggtatgcgtgctgatgtgtgg
aacaaatttattgaaagatttgggaagaaaatcaaaattcgtgagttttacgcggcaact
gaaggaaattgtggattcatcaatatgtttgatgaagttggttacgtaggaacgtgctca
ccattaatgaagtggtgtgtagaagtccctttaaaccaacctggactttgtattactaaa
gtaacgaagttagcgcagtaccaaccttacaaaggtgacccgaaaatgactgaaaggaaa
ttgctaaggaacgttttcaagcctggagacgagtactacatatcgggcgatcttttgcta
cgtgacgaccagtacagactcgcttttttcgaccgagtcggcgacacttttcggtggaaa
ggcgaaaatgtttctacgaacgaagttagcgatactgttgtgttagctggcgggattaaa
gagtcgaatgtttatggagtcgaaatacctggttgtgacgggcgggcaggaatggcaact
attgtaatagacgaagaaatctttagttttgaaagtctataccgtttcctcgatgacgta
cttcccaaatatgcagtcccagtttttataagaaccagcagcgaactgcaacttacttcg
acattaaagcaacagaaaacttctctcaaagacgaagcttacgacctaacaagagtaacg
gatccaatatacataatcaaccgcaagcaagcaacttacaccctactaactccggaattg
ctccagcaaataaagaaccgggaattgcgtttttaa
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