Ciona intestinalis (yellow sea squirt): 100179742
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Entry
100179742 CDS
T01056
Name
(RefSeq) biotin--protein ligase isoform X2
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00780
Biotin metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
100179742
Enzymes [BR:
cin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
100179742
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
100179742
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
100179742
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
100179742
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
FAM180
BPL_C
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
100179742
NCBI-ProteinID:
XP_018669443
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Position
11:complement(3396776..3408756)
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AA seq
610 aa
AA seq
DB search
MKLFSSWKTMLNPFLYKDRTSSSVLNTVFKTQSDNVCKINPNVTQMKPPNILLYSPGKRH
EVSDGAIKLLQLCLAKHSYTLYPISTTSFRKDPWIKNTHTVIVWGCESFFSDKDNQTHTS
NLLKSFITSGGNILMFNYIPVSEPSPFHVEKLPIISGPLFIKQGEEKKVLEQKYFPSFVL
KGNAKSIHEVIVDEKLLNVSMHHSTENTGKLSISTLPLLVGANDTATNPMVCSLLKQLLK
SVGLNCCDDDVQVIVNQMQQKIAFLYSNTLQLQEEFLQSLQKIESFALIPYNNDITPESV
QELTERSNKTTLVYTKEENVYNYSTKLSCSFNQDVYFNNLSTRSYGRIVVYGDVMTSTMS
VFDGLTCTKLPPNLGAVAIAKQQTMGKGRSGNQWISPLGCAMFTIVVDIPMNSKLGQCLP
FLQLITTTAAVKGVRSINKLQDVELRIKWPNDIYYGKHVKLGGVVVQSTMLNNMCYASIG
CGINVSNSQPTMCVNKILRDEHSLQLQLTTEEVIARTITELENLIIDFQKNGAESFLKIY
YKYWLHSMAEVEVIMDESNTKVECTVVGVDDYGFLRVRRHDTAEVTTLCPDGNSFDMMQN
QILPKLKRKT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattttcttcgtggaaaaccatgttaaacccgttcctttacaaagaccgcacc
tccagttctgtgttaaacactgtgtttaaaacacaatctgataatgtgtgtaagataaat
ccaaatgtgacacaaatgaagccacccaacatactactgtacagtcctggtaaacggcat
gaagtatctgatggagccataaagctacttcaactgtgcctagcaaaacacagctacacc
ctctacccaatttcaaccaccagttttcgaaaagatccttggattaaaaacactcacaca
gttatagtttgggggtgtgaatcattcttttcagacaaagataaccagacccataccagc
aacttacttaaaagcttcattacttcaggaggcaatatcctgatgttcaattatatccct
gtgtctgaaccatcaccatttcatgttgagaaattgccgattatttctgggcccctgttt
ataaaacaaggcgaagaaaaaaaggtcctcgaacaaaaatatttcccatcatttgtttta
aaaggaaatgcaaagtccattcatgaagtcattgttgatgaaaaattgttgaatgtatca
atgcatcactctacagagaatactggaaaactttctatttcaacgctaccactcttggtc
ggggcaaatgacacagcaacaaaccctatggtttgttctttgttgaaacaacttttaaaa
tctgttggtctaaattgctgtgacgatgatgtgcaagttattgtaaatcaaatgcaacag
aaaattgcctttctgtattccaacacactacaactgcaggaggaattccttcagagtttg
cagaaaattgaaagttttgcgttgattccttataacaatgatattactccagaatctgtg
caagaattgactgaacgcagcaacaaaacaaccttagtttacacaaaggaagaaaatgtt
tataattactcaacaaagctgtcatgttcgtttaatcaagatgtttacttcaacaatctt
tcaacacgttcatacggtcgcattgttgtgtatggcgatgttatgacctcaactatgagc
gtttttgatggattgacatgcacaaaactgccaccaaatcttggagctgttgctattgct
aagcagcaaactatgggaaaaggtagaagtggtaaccaatggattagcccattaggttgt
gctatgtttacaatagtggtggacattccaatgaattcaaaacttgggcaatgtttgcct
ttcctacaacttataactacaactgctgcagttaaaggagtaagatctataaacaaacta
caggatgttgaattacgcataaaatggccgaatgatatttattatggaaagcatgtaaag
ttgggtggggtggttgtccaatctaccatgttaaacaacatgtgctatgcatctataggt
tgtggaataaatgtttcaaacagtcaaccaactatgtgcgtgaacaaaatactgagagat
gaacactcactacagctacaactaactacagaagaggttatagcaagaactattactgaa
ctagaaaatcttattatagatttccaaaaaaatggagcagagtcatttcttaagatatac
tataaatactggcttcatagcatggctgaggtagaagttataatggacgagtcaaacaca
aaagttgagtgcacagtggttggggtagatgactacgggttcttacgagtacgtcgtcat
gacactgcggaagttacaactctctgtccagatggaaacagcttcgatatgatgcagaat
caaattctgccaaaactgaaacggaaaacataa
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