Ciona intestinalis (yellow sea squirt): 100180564
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Entry
100180564 CDS
T01056
Name
(RefSeq) peroxisomal bifunctional enzyme-like isoform X1
KO
K07514
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase [EC:
4.2.1.17
1.1.1.35
5.3.3.8
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00071
Fatty acid degradation
cin00280
Valine, leucine and isoleucine degradation
cin00310
Lysine degradation
cin00380
Tryptophan metabolism
cin00410
beta-Alanine metabolism
cin00640
Propanoate metabolism
cin00650
Butanoate metabolism
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
cin04146
Peroxisome
Module
cin_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
cin_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
100180564
00650 Butanoate metabolism
100180564
09103 Lipid metabolism
00071 Fatty acid degradation
100180564
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100180564
00310 Lysine degradation
100180564
00380 Tryptophan metabolism
100180564
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
100180564
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100180564
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
100180564
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
100180564
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
100180564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
NAD_binding_2
F420_oxidored
AdoHcyase_NAD
TrkA_N
Gly_rich_SFCGS
ApbA
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
100180564
NCBI-ProteinID:
XP_002125312
Ensembl:
ENSCING00000002986
UniProt:
F6QYC9
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MHRSSCWCILSRNYTMATLMNGSQYADLSEQKLRNWSLPSTTANGNVSPMMVRKTAVLGL
GTMGRGIAISLLKAGKIVYVFEMNKTSLDSGVNALYDILHRLVQRKLMTQQNMQQLKAAI
IPSHNYNDLHDVDLVIEAVFEDKQLKKTIFKKLDEVCKPSAILATNTSSLNIDEIASVTK
RPDKVIGMHFFAPAHLMRLLENVRGSNSSPQTIVTAMDLGKQMNKVTVLVGNCKGFVGNR
MYFYYIIESDFLLEEGAYPHEVDKALTDYGFTMGRYQVGDLSGNDVHYRVREMQGMLQKQ
QPTSAPERYRNGVRYCPLADMLVEAGRHGQKTDGKGWYQYIAGSRMPRIDPQVIKMIDDH
RTKHNIKPRKISEKEIIERLLYPMINEGFKILEDGIADNPWDIDMVWLHGYAWPRNTGGP
MFYANTVGLPQVLKVIEERWKLAGASEPHWKPSKMLTWLIKHHGNPDINDWIKLYKERNA
RKRSNL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttcttcttgttggtgcatattatcaagaaattacactatggcaactctaatg
aatggctcacagtatgccgacttatctgagcaaaagttaagaaattggagtttgccttca
acaacagcaaatggtaatgtttcaccaatgatggttaggaaaacagcagttcttggactg
ggaaccatgggtaggggaattgcaatctctttactaaaagcaggaaaaattgtttatgtg
tttgaaatgaacaaaacttcattggattctggtgtgaatgcattgtatgacattcttcat
cgattggtgcaaagaaagttgatgacgcagcaaaatatgcagcaattaaaagctgctatt
ataccgagtcacaactacaatgatttacatgatgtagatttggtgattgaagctgtgttt
gaagataagcaattgaagaaaaccatcttcaagaaattagacgaagtttgtaaaccttca
gcaatattagcaaccaacacaagttctttaaacattgatgaaattgcttcagtaaccaaa
agacctgacaaggtaattggaatgcatttttttgctccagctcatttaatgcgacttctt
gaaaatgtccgaggttctaattcttccccacaaaccattgttactgctatggatcttgga
aaacaaatgaataaagtcacagtacttgttgggaactgtaaaggttttgttggaaatcga
atgtacttttattacattattgagtcggattttcttcttgaggaaggtgcttatccccat
gaggttgacaaggcattaacagattatggtttcacaatgggaagataccaagttggggat
ttatcgggtaacgatgttcattatagagttcgtgagatgcaaggaatgctgcagaaacaa
caaccaaccagtgcacctgaacgttacagaaatggggtccggtattgtcctttggcggac
atgttggttgaagctggcagacatggccagaaaacagatggtaaaggatggtatcaatac
attgcagggtcaagaatgccaagaattgacccacaagttataaagatgattgatgatcat
agaacaaaacataacataaaaccaaggaaaatatcagaaaaggagataatagaaaggctt
ctgtaccccatgataaatgaaggttttaaaatacttgaagatggaattgctgataatcca
tgggacatagacatggtgtggttgcatggttacgcttggcccaggaacacaggcgggccc
atgttttatgcaaatactgttggtttgccccaagtattgaaggtgattgaagaaagatgg
aagttggctggtgcaagtgaaccacactggaagccaagtaagatgctcacatggttgatt
aaacatcatggtaatcctgatattaatgattggatcaaactatacaaggaaaggaatgca
agaaaaagaagcaatctttga
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