KEGG   Ciona intestinalis (yellow sea squirt): 100182874
Entry
100182874         CDS       T01056                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03020  RNA polymerase
cin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100182874
  09124 Replication and repair
   03420 Nucleotide excision repair
    100182874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100182874
   03400 DNA repair and recombination proteins [BR:cin03400]
    100182874
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100182874
  RNA polymerase III system
   RNA polymerase III
     100182874
  RNA polymerase I system
   RNA polymerase I
     100182874
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100182874
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C Mrr_cat
Other DBs
NCBI-GeneID: 100182874
NCBI-ProteinID: XP_002130595
Ensembl: ENSCING00000024933
LinkDB
Position
4:complement(1746071..1747059)
AA seq 210 aa
MDDEAETYRLWRIRKTVMQLCHDRGYLVTQHELDQSLEEFKEEFGDKPSERRPGRQDLTI
LVAHNDDPTDQMFVFFPEEPKVGVKTIKTYCQRMQEENIQRAIIVVQQSMTPSAKQSLFD
MAPKYILEQFLEQELLINITEHELVPEHVVLTPEEKSELLTRYKLKDHQLPRIQAGDPVA
RYFGLKRGQVVKIVRPSETAGRYVTYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagctgaaacctacagactgtggagaataagaaagactgttatgcagcta
tgtcatgatcgtggctacctcgtaactcaacatgagttggatcaatctttagaagaattc
aaagaagaatttggcgataaaccgagtgaaagaaggcctggtagacaagatttaaccatt
ctggtggcccataatgatgatcccactgatcaaatgtttgtttttttccccgaggagcca
aaggttggtgtaaaaactatcaaaacatattgccagaggatgcaagaagaaaatattcaa
agagcgataattgttgtgcaacaaagcatgactccttctgccaaacaatccctatttgat
atggcaccaaaatatattttagagcagttcttggaacaggaactgctgatcaatatcact
gagcatgaacttgtaccagaacatgttgtactaactcctgaagaaaagtcagaacttttg
actcgatacaagttaaaagatcaccaactgcccaggatacaggctggagacccagttgca
cgttattttggacttaaacgtggacaagtggtcaaaattgtgcgacctagtgaaactgct
ggtcgttacgtaacatacagattagttcaataa

DBGET integrated database retrieval system