Ciona intestinalis (yellow sea squirt): 100183815
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Entry
100183815 CDS
T01056
Name
(RefSeq) peroxisomal sarcosine oxidase-like isoform X1
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00260
Glycine, serine and threonine metabolism
cin00310
Lysine degradation
cin01100
Metabolic pathways
cin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100183815
00310 Lysine degradation
100183815
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100183815
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
100183815
1.5.3.7 L-pipecolate oxidase
100183815
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Gene cluster
GFIT
Motif
Pfam:
DAO
GIDA
HI0933_like
Pyr_redox_2
NAD_binding_8
Amino_oxidase
FAD_binding_2
Thi4
FAD_oxidored
FAD_binding_3
ThiF
Pyr_redox
2-Hacid_dh_C
3HCDH_N
ApbA
Motif
Other DBs
NCBI-GeneID:
100183815
NCBI-ProteinID:
XP_002124441
Ensembl:
ENSCING00000013532
LinkDB
All DBs
Position
4:complement(3302760..3307957)
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AA seq
393 aa
AA seq
DB search
MNSFDVIVIGAGVIGSCTAYQLAKLDVKTLMIEQFPLPHTRGSSCGQTRMTQRSDRNPYR
SDLVPESIAFWKSLEKDYGTPLLIKTGHLGISVSEESNYALEPIKVHMRKSNVDYTEMRG
QDIGNSFPGLDFDSQFGAYYVPNGFILKATKCLHALQSGFVKHGGTLQENEKVIEVKHLS
ANSVSMRTDSHKVYYAKSVVLACGPWINKVLRPLDIELDLQSVRVTTYYWREKELGKYSI
HNNFPTIVLYFGVFHVYSTPSYEYPGLIKICYHYRAPVDPDAPDLLDMESEKAEVEQLET
LKQIISKHFPQLESVPVLSENALQTVTPTSDFIIDKLPGFPNIVIGAGFSGTGFGPAPAI
GRALSKLATFQDPGQDMKTFALGSRLIYTKSSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttcgatgttatagtcattggtgctggtgtaataggatcttgtacagcctac
cagcttgctaagttggacgttaaaacgttaatgattgaacagtttcctctgccacacaca
aggggaagctcatgcggtcaaacaaggatgacccaacgttctgatcgtaatccatatagg
tcagatcttgtgcctgaatcaattgcattttggaaaagtcttgaaaaagattatggcacg
cctttgttaataaaaactgggcatttaggcatttctgtatcagaggaatcaaactatgct
cttgaaccgatcaaagtacatatgagaaagtcgaacgtggattacaccgagatgcgtggt
caggatatcgggaactcatttcccggacttgattttgactctcagtttggagcgtattac
gtaccaaacggtttcatcttaaaagccacaaaatgcctccatgctttacagagtgggttc
gtgaaacatggtggaacgcttcaagaaaatgagaaagtaattgaagttaaacatttatca
gcgaacagtgtaagcatgcgaacggattctcataaagtatattacgccaagagtgttgtt
cttgcttgtggaccttggataaacaaagtgttgcgaccattggacatagaactcgatttg
caatctgttcgcgtcaccacatactattggagagaaaaagaacttgggaagtattccatt
cataataactttccaacaatagtactttattttggagtctttcacgtctattcaacacct
tcctacgagtacccgggacttataaagatatgctaccattatcgagcacctgtagaccca
gacgcaccggatttactagacatggaaagcgagaaagcggaggtggagcaattggaaact
ctcaaacaaataatttccaagcattttccacagctggagtccgttccagtactgagcgaa
aatgcgttacagacggtgacgccaacttcggattttatcatagacaagttaccgggtttt
ccgaatattgtaatcggcgctggtttttctgggacgggattcggacctgcacctgccatc
ggtagggcattgagtaaattggcaactttccaggatcctggtcaagatatgaaaacgttt
gcattaggctcgaggctcatttacacaaaatcatctttataa
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