Ciona intestinalis (yellow sea squirt): 100185245
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Entry
100185245 CDS
T01056
Name
(RefSeq) sphingosine-1-phosphate lyase 1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100185245
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
100185245
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
100185245
NCBI-ProteinID:
XP_002127038
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Position
1:complement(8446833..8449217)
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AA seq
562 aa
AA seq
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MTEVLNQILNKTVDSYNLATKWVNSSCSNLLPHEIIIITVITIFFTFNLYNFIFENDKSF
FERVKVGFFYHAKRLPIIRSIVKQQMESVLNEVSAEKLFPLKSGMHYLNKLPIRGKTHLQ
IDRVVEEYLSLDDVDWKNGNVSGTVYGGDAGLTDVITKVYKKFAWSNPLHPEVFPGLRKM
EAEIVRISCELFNGNPQTSCGSVTIGGTESILLACKTYRDWAYGKGIQKPEIVCPVSVHA
AFEKAAHYFRMKLVHVPVDSVTRKVNVSAMKNAISRNTCMLVGSTPPFPHGVLDPITEIA
ALGMKYNIPVHVDACLGGFLLPFMSDAGFPVPPFDFSVPGVTSISADTHKYGYSPKGSSV
VLYSDKKWIHYQYFVSPDWQGGIYATPMFAGSRSGAIIAACWATMMYFGREGYVNRTKKI
ITTARYIEQGLRKIEYIYVLGKPEMSVVALGSLDFDVFRLSTELVKRGWNLNNLQFPASI
HICCTMPHTHPGVADRLLQDIRESVDIIMSDPKAKATGAGAIYGMAQSIPDRSIVTEISH
GFIDALYDTGSKSVANGNGYAK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttttaaaccagattcttaataagacggttgattcttataatttggcgaca
aaatgggtgaattcatcgtgttcaaatttgttacctcatgaaattattatcatcactgta
ataaccatctttttcaccttcaatctttacaattttatcttcgaaaacgacaaaagtttt
tttgaacgagtgaaggtcggtttcttctaccatgctaagcgtttgccaatcattcggtcg
attgtaaaacagcaaatggagagcgttcttaatgaagtttcagcagaaaaattgtttcct
ttgaagtctggcatgcattacctcaataaattgccaatccgcggtaaaacgcatctacaa
attgacagagtggtggaagagtatttatctttggatgacgttgattggaaaaacggaaat
gtgtcgggtactgtgtatgggggagacgctgggttaactgatgtgattacaaaggtttat
aagaagtttgcgtggagtaatccattacatccggaagtttttccaggtcttcgtaaaatg
gaggcagagatcgtaaggatctcatgcgagttgtttaatgggaatccacaaacttcatgc
gggagtgttactattgggggcactgagagtattttacttgcgtgtaaaacctacagagat
tgggcttatggaaaaggaattcaaaaaccggagattgtttgcccagtcagcgtacacgct
gcttttgaaaaggctgctcattattttaggatgaagttagttcatgttcctgtggactct
gtaacgcgcaaagtaaacgtcagcgcaatgaaaaatgctatttctagaaacacttgtatg
ttagttggttcgacccctcctttccctcatggagttctagatcctatcacggaaattgct
gctctaggcatgaaatacaatatccctgttcatgtagatgcttgtttgggtggctttcta
cttccatttatgagtgatgcaggttttcctgtccctcctttcgatttctcagtaccgggc
gtgacgagcatatccgctgacacccacaaatatggttacagccctaaaggatcttcagtt
gtcctgtacagtgacaagaagtggattcattaccagtattttgtatcccctgactggcag
ggtggcatatatgccactcctatgttcgcaggcagtagaagtggtgctatcatcgctgca
tgctgggcaaccatgatgtacttcggccgtgaaggttatgtcaatcgtacaaagaagata
atcacaacagctcggtacatagaacaagggttaagaaagattgagtatatctatgtatta
gggaagccagaaatgtcagttgttgctttggggagtcttgattttgatgtctttcgtctc
tccactgagttagtaaagcgtggttggaacttaaacaaccttcagtttcctgcgagcatc
catatatgctgtacgatgccgcatacccaccctggtgtagctgatcgattgcttcaagat
atccgtgagagtgtagatatcattatgagcgaccctaaagcaaaagctacgggtgctggg
gcaatttacgggatggcgcaatcgatacctgatcgttctatcgtaactgaaatatcccat
ggttttatcgacgccctctatgacacgggcagcaagtctgttgctaacggaaacgggtac
gcaaagtga
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