Ciona intestinalis (yellow sea squirt): 100185336
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Entry
100185336 CDS
T01056
Name
(RefSeq) calcium-activated chloride channel regulator 3A-1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100185336
Ion channels [BR:
cin04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
100185336
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GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
VWA_CoxE
DUF1194
VWA_3
GEVED
Motif
Other DBs
NCBI-GeneID:
100185336
NCBI-ProteinID:
XP_002129197
Ensembl:
ENSCING00000001920
LinkDB
All DBs
Position
3:complement(3340181..3353454)
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AA seq
1034 aa
AA seq
DB search
MKTPLREIFFVCCSFYFVSATFDSVSLVGNSYQGVVIAINPEIAESTTLLNSIKAAWTEA
SAALYTATRKRAYFGNITILVPKSWNGTYKRAFDETYDAADVVVTNTNRVRGNIPYVLQP
GGCGEPGTRIFTTRDYYTNDTYVESFGQRGKVMVHEWSHYRWGVFDEIASGDYAPFYISS
TGTIEATRCSLGIQGENMIVQNNEIVQDVCNYDPQTLLPNSTDCKFILAWDQDLDLKASI
MSYQYVNEINGFCDDNDNDPLNRHNREAPNEHNDKCNKRSVWDVITSSVDFTGGRNLANP
NVASTIPTFRVVKPFPYRSFVLVLDVSGSMWGGRLTKMRQIMNTFVDDFVQRGDYVGITI
FSTIARKLSPLTRIRDQSDRASLIRRLPRSVRGSTCIGCGINSAVQIMEQHSPDLCGDII
VFTDGEENVEPSVADVHDKVVKKKCRVSAVFFTTTANQALVRLVDATSGTWFYGDTDDIT
PLIGAYNQLSKSKDGDVIQQANMIHSTSKVMEAGQSFTTDVEMDATIGVLTVFSFTWSDG
DVSPGILITSPSGCSYSTNDVDSPNPCPGHPLANVKPAFKTVKFTIPGTAQVGKWRYRVT
TASLQTVSVTVTSKSRGKKPIVVSVNTIPGKKGVPMKIFARVTIDDVPLIGANVRAVIKY
PNTTKQTLPLYDEGANPDTTRNDGTYSRFFFSSAVGGGRYSLQVLASGKPGENKSKHINF
GKPAAFKIGYVYQNGTVVLNKNKEDEGATDETIETETIGDFSRVVVGQSFEYTGPKVDRD
IDQQPPSKVTDLKLKQTIASDVTSPLSLTFTAPGDDFDSGTTSSYELRYTLSSPQNLLTS
FESQLEVNETGFVRNQTALPKPAGFQESILVKPPAISNTANFTSVSYSIRGIDDAGNRGP
PSNVATVNLLKIKPVVPTLIPRTTPPPTTPATVRNMALCRAMYNRAYRATFRLVCPRPMM
TKSCGVAVDAFYWTEETYNVDCGSVNAWKACRSAYTNACRSRWCRTCRREDPWRSGLYSD
GRRLRPHYYRANRY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacctctgcgcgagatattctttgtttgttgcagtttttattttgtttctgca
acattcgactccgttagtctggtaggcaattcctaccaaggtgttgtaatcgccatcaac
cctgagatagcggaaagcacaacacttcttaattctattaaggctgcctggacagaagca
tcggcggctttgtatacagcgacgagaaaacgagcatattttggaaacattaccatactt
gtacctaagtcatggaatggaacttacaaaagggcctttgacgaaacctacgatgccgct
gacgtagtagttacaaacaccaacagagtacgtggtaacatcccgtatgttctacaacct
ggtgggtgtggtgaacctggtacaaggatatttacaacacgggattattatacgaatgat
acttacgttgagagtttcggacagagaggcaaggtaatggtgcatgaatggtctcactat
cgctggggtgtttttgacgagattgcttctggtgattacgcgccgttctatatatcctca
acgggtactattgaagctacaagatgttctttggggatacaaggagaaaacatgatagtt
cagaacaatgagattgtgcaagacgtatgtaattacgacccacaaacgttgctacccaat
tctacagattgcaagtttattcttgcatgggaccaggaccttgacttaaaggcatctatt
atgtcttaccaatatgttaatgagattaatggattttgtgacgacaacgataacgatcca
ttaaaccggcataacagagaagcaccgaatgagcacaacgacaaatgcaacaaacgaagt
gtttgggacgttattacatcatcagtagatttcaccggcggccgcaatttggccaacccg
aatgttgcaagcacaatacccacgttccgggttgtgaaaccgttcccgtatcgatcgttc
gtacttgtgttggatgtgtcgggcagtatgtggggggggcgacttactaaaatgaggcaa
ataatgaacacattcgttgacgacttcgtacaacgtggggactacgttggtatcacgata
ttttcaaccattgctcgaaaattaagtcctttgaccaggatcagggatcaaagtgatcga
gcatcactcatccggcgtcttcccagatcagtgagaggaagtacttgtatcggttgtgga
ataaattcagctgttcagattatggagcagcactcccctgatctatgtggggatattatc
gtcttcactgacggggaagagaatgtggaacctagcgttgctgatgtgcatgataaagtt
gttaagaagaaatgtagagtaagcgcagtttttttcacgacgaccgccaaccaagctcta
gtccgattggtcgacgcaacttctggtacttggttttatggagatacagatgatataaca
ccattgattggagcgtacaaccagctttcaaaaagtaaagatggtgacgtcatccagcaa
gctaatatgatccacagtacatcaaaagtcatggaagcaggtcaaagttttactactgac
gttgaaatggacgctacgattggggttctgactgttttttcattcacctggtcagatggg
gacgtttctccgggtattttaatcacttccccaagcggttgttcgtattccacaaacgac
gttgattcaccaaacccatgtccaggccatccactagctaacgttaaacctgcgttcaaa
acagtcaagtttacaataccaggcacagctcaagttggcaaatggagatatcgcgtgaca
acagcaagcctacagaccgtatccgtaactgtgacttcaaaatcccgtggtaagaaacca
attgtcgtttcagtgaatacgataccgggcaagaaaggagtgccaatgaaaatctttgct
agggtgactatagatgacgtaccactgatcggtgccaacgttagagcagtaataaaatat
ccgaacaccacgaaacaaacattacctttgtatgatgaaggagcaaatccggatacgacg
agaaacgacggtacttactccaggtttttcttttccagcgcagttggagggggtcgctac
agtttacaggttctagcatctggaaaaccgggcgaaaataaatcgaaacatatcaacttt
ggaaaaccggccgcttttaaaataggatatgtgtaccaaaatggaaccgtggtattgaat
aaaaacaaagaagacgagggggctactgatgaaacgattgaaacagaaacgattggagac
ttttcaagagtggttgtcggccaaagcttcgaatacactgggcctaaagttgaccgagac
attgaccaacagccgccgagtaaagtgacggacctgaaactaaaacaaaccatcgcctct
gacgtcacttctcctctatcgcttactttcacagctcctggggacgactttgattcgggg
acaacatcgtcatacgagcttcgatatactttgtcaagcccacaaaacctcttgacttct
ttcgaaagtcagcttgaagtgaatgagacaggttttgtaagaaatcaaacggccttacca
aaacccgctggtttccaagaatcgattttggtaaaaccaccagccatttcgaatactgcc
aactttacgagcgtctcgtactcaattcgaggtatagacgacgctggcaatcgtggtcct
ccatcaaatgttgcaacggtcaacctcctaaagattaaaccagtcgttccaaccctgata
ccccgtaccacaccaccccccactacacccgcaacagttcgaaacatggcactttgtcga
gcgatgtataacagagcgtacagagcaacttttcgattggtctgtccacgtcccatgatg
acaaaaagttgtggcgttgccgtagatgcgttttactggacggaggagacttacaacgta
gactgcggttcggtgaacgcatggaaagcgtgtcgatctgcttatacaaatgcgtgtcgt
tcaagatggtgcagaacatgtagaagagaagatccttggagatctggtctttacagcgat
ggtagaagattacgaccacattactacagagccaaccgttattaa
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