Ciona intestinalis (yellow sea squirt): 100185430
Help
Entry
100185430 CDS
T01056
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100185430
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100185430
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100185430
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
100185430
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (A)
100185430
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100185430
Prokaryotic type
Other AARSs
100185430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA_synt_1c_R2
tRNA-synt_1c_C2
tRNA-synt_1c_C
Fur_reg_FbpA
Motif
Other DBs
NCBI-GeneID:
100185430
NCBI-ProteinID:
XP_002131102
Ensembl:
ENSCING00000009130
LinkDB
All DBs
Position
2:5764724..5771265
Genome browser
AA seq
770 aa
AA seq
DB search
MPDLANLFVSVGLTEQKAKETVKNKNVSATFVEAIDLAKKSCEVDKSIGGLLYQISTRLK
HKEHLPVIVKFVAGKKIKTEIQLSCALDYLKNNPSIPVDEQKFSDASGVGVEISPAQVEE
VIENLVNENKAELLSQRYRFNTGKILATARKLLKFADGRIVKSELDMQILDLLGPKTEAD
FGPVAKGKKEKKEKSGSKSGKEEEQQWEDRSLMEQLRGAALKFHKPGENYKTEGYVITDN
TMRLMGEHLKITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANDGICFLRYDDTNPE
KEEEKFFTGILAMVKWLGYTPYKVTHASDYFQELYDLAVVLIKKDLAYACHQKYEEIKGI
NPPPSPWRNRPISESLALFEDMRKGKLDEGSTTIRMKHIMEDGKQDPVAYRIKFTPHHRT
GDKWCIYPTYDFTHCLCDSLEHISHSLCTKEFQARRSSYFWLCNSVDVYCPVQWEYGRLN
LQYTVVSKRKIQKLIDAGIVRDWDDPRLFTLTALRRRGFPPEALNDFCAKVGVTGNLCIL
EPTMLESCVRTTLNNTAPRVMAVLDPLKITITNFPSDEGSIEIKVPNFPADESRGHHSSN
LTKSLYIERTDFMDIADKNYKRFASNQSVGLRHAGLVLTLDRAVKGDNGDVTELIVTCKS
VEESPKPKAFIHWVSATSSLACEIRVYSRLFKHKNPEDPAVVPGGFVTDCNSNTLTVNTA
ARVEASVKNSKVFDKFQFERLGYFCVDPDTNDNKIVFNRTIPLKEDPGKN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttagctaacttgtttgtttctgttggccttactgaacaaaaagcaaaggaa
acagtgaaaaacaagaatgtatcagctactttcgtggaagcaattgatttggcaaagaag
tcctgtgaggttgacaagtccattggaggtcttctttaccaaatctccactcgtttgaaa
cacaaagaacatcttccggtcatagttaagttcgtggcgggcaagaaaataaaaacagag
atccagttaagttgcgctcttgattatctgaagaacaatccctccatacctgtggatgag
caaaagttctccgatgcaagcggggtgggggtggaaatatctcccgcacaagtggaggaa
gtgattgaaaacttggtgaacgaaaataaagctgagcttttaagccaacgttaccgcttt
aacactggaaaaatcttggccacggctagaaaacttcttaaatttgccgatggacgaatc
gtaaagagtgagcttgatatgcagattctagatttgcttggtccaaaaactgaggcagat
tttggacctgtagctaaaggaaagaaagagaagaaggaaaaaagtgggagcaagagtggg
aaggaagaggagcaacaatgggaggataggagtctgatggagcagttgagaggagctgct
ttaaaattccacaaaccgggtgaaaattataaaactgaaggctatgtaatcactgataac
acgatgagattgatgggggaacatcttaaaatcactggagggcaggttagaacgagattt
ccaccagagccaaatggaatccttcacattggtcatgccaaggcgatcaactttaacttt
ggttacgcgaaagcaaacgacggaatctgcttccttagatatgatgatacaaacccagaa
aaagaggaagaaaaattcttcaccgggattttagcaatggttaagtggcttggatacacc
ccttacaaagtgacccacgcatcagattatttccaagagttatacgaccttgctgttgtg
cttatcaagaaggacttggcttatgcttgtcatcagaaatatgaagaaatcaaaggaatt
aaccctccaccctctccatggaggaatcgaccaatctcggaatctcttgctctttttgag
gacatgagaaaggggaagttggatgaagggagcaccaccatccggatgaaacacatcatg
gaggatggaaaacaagatcccgtcgcttatcggatcaaatttactcctcatcatagaact
ggggataaatggtgtatctacccgacttacgacttcacgcattgcctctgcgatagttta
gaacatatttctcattctctttgcacgaaggagttccaagccaggcgttcaagttacttt
tggttgtgcaattcggttgatgtatattgtcctgtgcagtgggaatatgggcgtcttaat
ttgcaatacacagttgtgtccaagaggaagattcagaagttgattgatgcagggattgtg
agggattgggacgatcctcgactttttactctcactgctcttagaagaagaggatttcct
ccagaggcgttgaacgatttctgtgccaaggttggggtaactggcaatctttgtatattg
gaacccaccatgttggagtcatgcgtgaggacaactcttaacaacacagcaccaagagtg
atggccgtgttggatcctctcaagatcaccatcaccaacttcccaagtgatgagggatca
atcgagatcaaagttcccaacttccctgctgatgaatcgcgaggacatcattcatccaac
ctcaccaagtccttatatattgaaagaacagatttcatggatattgcagacaaaaactac
aagaggttcgcatcgaatcagagcgtcgggttacgtcatgcaggtttggttctcacgctt
gaccgagcagtgaaaggagacaacggtgacgtcactgagctcattgtgacgtgtaaatcg
gttgaagaatccccgaaaccaaaagcttttatccactgggtgtcagcaacgagcagtctg
gcatgcgagattcgcgtgtacagcagattatttaagcacaaaaacccggaggacccagca
gtggttccaggcggttttgtgacggattgcaactccaatacactgacggttaacactgct
gcgagggtggaagcgtcggttaaaaattccaaagttttcgacaaatttcagttcgagcga
cttggttacttctgtgtggatcccgatactaacgataacaagattgtttttaaccgcacc
atcccactgaaagaggaccccggtaaaaactga
DBGET
integrated database retrieval system
