Ciona intestinalis (yellow sea squirt): 100185593
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Entry
100185593 CDS
T01056
Name
(RefSeq) acetoacetyl-CoA synthetase-like
KO
K01907
acetoacetyl-CoA synthetase [EC:
6.2.1.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00280
Valine, leucine and isoleucine degradation
cin00650
Butanoate metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100185593
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100185593
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cin01004
]
100185593
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.16 acetoacetate---CoA ligase
100185593
Lipid biosynthesis proteins [BR:
cin01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
100185593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ACAS_N
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100185593
NCBI-ProteinID:
XP_002129031
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MGPIKQDSEKALNRVMWTPDFSVKDNNMINFMQRINKKYNLALQSYDQLWEWSTKNYAEF
WGEVWDIMEIVHSTGYVKVVDVTKKITDNPEWFSGARINYAENMLRYDDDKVAILSAGEG
RNIESLSYKELRIKVALYSSALRKLGIESGDRVVGYIPNCTDAVVIMLAAASIGAIWSST
SPDFGVSGVLDRFQQIKPKIIFSVDAVRYNNKIHTHLDKLRQVVNGLADLQSVVVIPFVN
NMESVNIDDIPKSMMLSSFLQTGSTTDRLQFEQLPFNHPLFIMYSSGTTGPPKCMVHSAG
GTLIQHMKEHILHGNMMRSDKILYYTTTGWMMWNWLVGALSSGATIVLYDGSPFQPKANV
MFDLIDSLKITILGTSAKCLDVMEKYKLEPIKTHNLSTLHTVLSTGSPLAGHQYDYVYNN
IKADVLLGSITGGTDIISCFIGQNWTVPVHRGELQSANLGMSVACFLEDEEGNAIQVYDK
PAELVCTVPFPCMPTCFWNDDSGELYRNAYFSKLPGVWCHGDYCMQNSQTNGFVMLGRSD
ATLNPNGVRFGTSELYSVIESRFKEEINDSVAAAYRKYTKDSTSYTENVILFLKMADGFS
LDMKLENEIRQQIRAQLTPRHVPAILMQVQDIPYTISGKKVEMAVTQILAGMDVKHKGAF
KNPEALELYKNIVIPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggggccaattaaacaagatagtgaaaaggcattaaatagagtaatgtggaccccagac
ttcagtgtaaaggacaacaatatgatcaactttatgcaaagaataaacaagaagtacaat
ttagcactgcaaagttacgaccaattgtgggaatggtcaaccaaaaattatgcagagttc
tggggggaggtgtgggatattatggaaatagtacattctactgggtatgttaaagttgtg
gatgtgacaaaaaagattactgacaacccagaatggttctctggtgcaagaataaattat
gctgagaatatgttacgatatgatgatgataaagtggcaatactatctgctggtgaagga
agaaatattgaaagtttatcatacaaagagttgcgcattaaagttgcactgtattcatca
gcactgcgtaaactagggattgagagcggagatagagtagtggggtacatacctaactgc
actgacgccgtggtaattatgctggcagctgcaagtattggcgcaatatggagtagtaca
tcacctgattttggagtttctggagttttagatcggtttcagcaaatcaaaccaaaaatt
atattttcagtggatgcagttcgatataacaataaaattcatacgcatttggataaactg
cgacaagtggttaatggtctagcagatctacagtctgtagttgtgattccttttgttaat
aacatggaaagtgttaacatagatgacataccaaaaagtatgatgctatcctcttttctt
cagactgggtcaacaactgataggttgcagtttgagcaacttccatttaaccacccactg
tttattatgtactcatctggcaccacaggacctccaaaatgtatggttcattcagcagga
gggactttaatccaacacatgaaggaacacatattacatggtaacatgatgcgatcagat
aaaatattgtattacaccaccacaggatggatgatgtggaattggctggttggtgcttta
tcatccggtgcaaccattgttctctatgatggttcaccatttcaaccaaaagctaatgtc
atgtttgacttaatagatagtttgaaaataaccattttaggaaccagcgcaaagtgttta
gatgtgatggaaaagtacaagctggagccaattaaaactcataatttaagtaccttgcac
actgttctctccacaggttcacccttagctggccaccaatatgattatgtttacaataat
atcaaggccgatgttttattaggctcaataactggaggaacagatattatttcatgtttt
atcggacaaaactggacagtgcctgttcataggggtgaattacagtcagctaatcttggt
atgagcgttgcttgctttctagaagatgaagagggtaatgcgattcaggtttatgataaa
ccagcagagctagtgtgcactgttccattcccgtgcatgcctacttgcttttggaatgat
gattcaggagaattgtatagaaatgcatacttcagtaaattacctggtgtgtggtgtcat
ggtgattattgtatgcagaactcacaaaccaatggctttgttatgctaggcagaagtgat
gccacactaaatcctaacggagttagatttggaacttctgagttatactccgtaattgaa
tctcggtttaaagaagaaataaatgattctgttgcagctgcttaccgcaaatacacaaaa
gacagcacaagttacacagagaatgtcatcttgtttttaaagatggcagatggtttttca
cttgatatgaagttggaaaatgaaatacgccagcaaattcgtgcccaattaaccccacgc
catgtcccagctattctaatgcaagtacaagatatcccatacacaatcagtggaaagaaa
gtagaaatggctgtcacacaaattctagcgggtatggatgtcaaacataaaggagctttc
aaaaatccagaagctttggagttatataagaacatagtaatacccagctaa
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