Ciona intestinalis (yellow sea squirt): 100186221
Help
Entry
100186221 CDS
T01056
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00310
Lysine degradation
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100186221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100186221
03036 Chromosome and associated proteins [BR:
cin03036
]
100186221
Enzymes [BR:
cin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100186221
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100186221
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100186221
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100186221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2H2_11
zf-Di19
zf-met
zf-C2HE
zf_PR_Knuckle
Actin_micro
Motif
Other DBs
NCBI-GeneID:
100186221
NCBI-ProteinID:
XP_002130308
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MVVEQKITKQEQERIISEFFKSWNGFVSVPVEDIVKKVKFRVSLKNLFKPEEYAKLCRYE
KKRIRKIGRNLTIMMYLGLPLPNENELRAKIGLLPRGSLKQMAISDSDQDVDDDDWKPWK
RSKKKQGMLSVTDIMKRQQWLAKKCHVKNEEHDDTIVIPEEFKGPDYEKDSVASGTKKVV
KAKTKPELAVDRYPKRDLRLVKYKYPSDYKEDDFLYCDDCDKLYLGDCEVHGPYKPAPDA
VVKKGLIDRARKTSPDGISIAMSGIRAGGLGAWCDKGFSKNTVFGPYEGKAVHRNDVAKL
SRLFEGGYAWEIYKKGKLSHYIDGEDTKQSNWMRYINCACFEEQQNVIAYQYQGDIYYRL
YRDVTPGTELLVWYGDQYAQSLGIPTEYKTKCVQPEKETEAVRKLERKICLDQYFECETC
GKVFADKPTLLRHDKNKHPVRSSTNKHKCPWCEYSCDIVQLFERHKRTHTGEKPFKCDTC
GKRFSQKCSLKTHIRIHTKERPYPCDRCNKRFGRISNLKTHIRAVHDKIASFVCTECGAK
FGRGTNLTTHMRTHTGEKPYQCKECSAKFAVLSSLRQHVIIIHTKEYPHRCAICAKGFLT
PGELRKHKEKFH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggaacaaaaaattacaaagcaagaacaggaaagaattatttcagagtttttt
aaaagttggaatggttttgtctcggtaccagttgaggatatcgttaaaaaagtgaaattt
cgagtttcgttgaaaaatttgttcaagcctgaagaatacgcaaaattatgtcggtacgag
aaaaaaagaattcggaaaattggacgtaatttaacgataatgatgtatttaggtcttcca
ctaccaaatgaaaatgaattacgagcaaaaattggtcttctacctcgtggaagtttgaaa
caaatggcgatatctgacagtgaccaagatgttgatgatgatgattggaagccgtggaaa
cgaagtaaaaagaaacaagggatgctgagtgtaaccgacatcatgaagagacaacaatgg
ttggcaaagaaatgccatgttaaaaatgaagagcacgacgataccattgttataccggag
gaattcaaagggccagattatgaaaaagactctgtagcgagtggaaccaaaaaagttgtc
aaagcaaaaaccaaaccagagcttgctgtggatagatacccaaagagagacttacgactt
gtcaagtataaatacccaagcgattataaagaagatgattttctatattgcgacgactgc
gacaaactatatcttggtgattgtgaagtgcatggaccttacaaaccagctccagatgct
gttgttaaaaaaggtttgattgatcgtgccagaaagacatcgcccgatggaataagcatt
gctatgtcaggtataagggcgggtggattaggtgcttggtgcgacaagggtttcagtaaa
aacactgtgtttggtccgtatgaaggaaaagctgttcatcgaaacgatgtcgcaaaactt
tcacgactgtttgagggtggttacgcttgggagatttacaaaaaaggaaaactgtcccat
tacattgatggtgaagacaccaagcaaagtaactggatgagatatattaattgtgcatgt
tttgaagaacagcagaatgtcattgcgtaccagtaccagggagacatatactacagattg
tacagagacgtcacacctggtactgagctattggtttggtatggtgaccagtatgcgcaa
agtttgggaatccccactgaatacaaaacaaaatgtgttcaacctgaaaaagaaactgaa
gcagttcggaaattagaaaggaagatttgtctcgatcaatattttgaatgtgaaacatgc
ggaaaagtgttcgccgacaaaccaactttgttacgtcatgataagaacaaacaccccgtc
cgatcgtccacgaacaaacacaagtgtccatggtgcgaatattcgtgtgatattgttcaa
ctctttgaacgacacaaacgcactcacactggtgagaagccgttcaaatgcgacacttgt
gggaaacggttttcacaaaagtgcagcttaaagacccacatccgaatccacaccaaggag
cgaccttacccatgcgatagatgcaacaaacggtttggccgtattagtaacctgaaaaca
cacatccgagccgtccatgataaaatcgcgtcgttcgtgtgcacggagtgtggggcaaag
tttgggcgtgggacgaatctaaccacgcacatgcgaacccacaccggtgaaaaaccttat
caatgcaaagaatgttccgcgaagttcgcggtcttatcgagtttacgccaacacgtcata
ataatccacacaaaggaatatccgcaccgatgcgcgatttgcgcgaaaggattcttgaca
cccggtgaactacggaaacataaagagaaattccattaa
DBGET
integrated database retrieval system
