Ciona intestinalis (yellow sea squirt): 104266882
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Entry
104266882 CDS
T01056
Name
(RefSeq) heparan sulfate glucosamine 3-O-sulfotransferase 1-like
KO
K01024
[heparan sulfate]-glucosamine 3-sulfotransferase 1 [EC:
2.8.2.23
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104266882
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
104266882
Enzymes [BR:
cin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.23 [heparan sulfate]-glucosamine 3-sulfotransferase 1
104266882
Glycosyltransferases [BR:
cin01003
]
Unclassified
Sulfotransferases
104266882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Sulfotransfer_2
Motif
Other DBs
NCBI-GeneID:
104266882
NCBI-ProteinID:
XP_009862494
Ensembl:
ENSCING00000025091
LinkDB
All DBs
Position
1:8644705..8646644
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AA seq
322 aa
AA seq
DB search
MMQKQLRIINYLVIVGIVYRNITFYKSKLWDSYHTSVDNIVDILFDAVADENYCLHGGPC
VPKNYVSMYKSQSYPDAIIIGCKKCGTRALIDMMCLHPQIKALRREGHYFDDFYALGDYW
YKSRMPILADHEVAIEKTPSYMLSRLTAERIYNFNPDIKLIVILRNPVDRLISDYLQKQA
RFPKAVVLSVGETYIKNKTNTVDETKVHVQKGLYAKQLKPWLEIFGTKSILIEDGNAFTK
DPLPTLKRAQQFLGLKPHNNHVYFNKSKGFYCWLENSQTKCLAGAKGRKHPKIPSQQMNI
LKSYYTKPNEDLFRMIGKRFDW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaaacagttgagaatcattaactatttggtaatagttggaattgtttatcga
aacataacattttacaaatctaagctgtgggacagttaccatactagtgttgacaacata
gtggacatattgttcgatgcagtggcagatgaaaattattgtcttcatggaggtccttgt
gtcccgaaaaattatgtttcgatgtacaaaagtcaatcttatccagatgcgatcattatc
ggctgtaagaaatgtgggacgagggccctgattgatatgatgtgtttgcatcctcaaatt
aaagctttaagaagggaaggccattattttgacgatttttatgcactaggagattattgg
tataaaagcagaatgccaatacttgccgatcatgaagtggcaatagaaaagactccctca
tacatgttatcaagacttactgcagaacgaatttataactttaacccagatataaaactg
atagtcattctacgaaatcctgtggaccgattaataagtgattacctgcagaaacaagct
cgttttcctaaagctgttgtactttcagtaggagaaacttatataaaaaataaaaccaac
acagttgatgagactaaagttcatgtacaaaaaggtttatatgcaaagcaactaaaacct
tggttggaaatctttggcaccaagtctatacttattgaagatggcaatgcatttacaaag
gatcctcttcctacactaaaacgtgcacaacaattccttggtttaaaaccacacaacaat
catgtttatttcaataaatcaaagggattttactgctggttggaaaacagccagaccaaa
tgccttgctggtgcaaaaggaagaaaacacccaaagattccttcacaacagatgaacata
ttaaaatcatattacaccaaaccaaatgaagacctttttagaatgattggaaaacgattt
gattggtag
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