Ciona intestinalis (yellow sea squirt): 113474013
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Entry
113474013 CDS
T01056
Name
(RefSeq) trans-L-3-hydroxyproline dehydratase-like
KO
K18384
trans-L-3-hydroxyproline dehydratase [EC:
4.2.1.77
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00330
Arginine and proline metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
113474013
Enzymes [BR:
cin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.77 trans-L-3-hydroxyproline dehydratase
113474013
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Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
113474013
NCBI-ProteinID:
XP_026691825
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Position
9:6507202..6508748
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AA seq
337 aa
AA seq
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MPKINTTIRTVEMHTGGGPLRIIESGYPEIVGETILKKRAYVRDNLDHLRKFLMFEPRGH
SDMYGALPVTPDHRDADCAFLFLHNEGYSTMCGHAMIALGRYCVDKKLVNYQEPETKVNI
QCPCGLVEVFVSCSNGTSDAVRFFSVPAFAYKVGLDINVPEYGNVTVDISYGGAYYIILP
ISSVGLAFGKTSITDIKVAAKAIKKTCMENIKIDHPGDLDLAFFYGVILTDGNDVNYSVP
SANIVEFANEQIDRSPCGSGVTARMALMFAKNQIKLGERKTISNFLTKSSFTGVVTKVVD
SEMGKVVVEVCGNAYYTGTCCFTAEENDPQQLGFLVK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaattaatacgacgatacgaactgtcgaaatgcatactgggggtggcccgtta
aggattatagaatctggttatccagaaattgtgggtgagacaatacttaaaaagcgagct
tacgtgcgcgataatttagaccacttgagaaagtttcttatgtttgagcctcgtggtcat
tctgatatgtacggagctttaccggtcacaccagatcatcgtgatgcagattgtgctttc
ttattcttgcacaacgaaggctacagtactatgtgtgggcatgctatgatagccctgggc
agatactgcgttgataagaagttggtgaactaccaagaaccagaaaccaaagtgaacata
caatgtccatgtggtcttgtagaagtgtttgttagttgttctaatggaacttctgacgca
gttcgatttttcagcgttccagcttttgcctacaaagttggtttggacataaatgttcca
gagtatggcaacgttacagtggatatatcgtatggtggagcttactacatcattctccca
atatcatccgttggcttggcttttggtaaaacatccatcacagatattaaggttgctgct
aaagctataaaaaaaacctgtatggaaaatattaaaattgatcatcccggagacctggat
ttagcttttttctatggcgtcatactcactgatgggaatgacgtgaactattctgttcct
tcagcaaatatagttgagtttgcgaacgaacaaattgatagatcaccatgtggttctggt
gttactgctcgcatggctttaatgttcgccaaaaaccagatcaaacttggtgaaaggaaa
actatttccaactttttaacaaaatcatctttcactggagttgtaactaaagtagttgac
agtgaaatgggcaaagtggttgttgaggtttgcgggaacgcttactacacaggcacatgc
tgtttcactgctgaggaaaacgacccacaacaacttggatttcttgttaaataa
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