Ciona intestinalis (yellow sea squirt): 778681
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Entry
778681 CDS
T01056
Symbol
mitf
Name
(RefSeq) transcription factor protein
KO
K09105
transcription factor E3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
778681 (mitf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778681 (mitf)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
778681 (mitf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
TFIIA
Motif
Other DBs
NCBI-GeneID:
778681
NCBI-ProteinID:
NP_001071764
Ensembl:
ENSCING00000004702
UniProt:
Q4H369
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All DBs
Position
10:2737440..2757514
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AA seq
543 aa
AA seq
DB search
MGSRANMKMQLQRDKALMEEKRLRQASQNAAQASKSSSSSTINMPVVTLTSPPQLPVQVL
KVETGLQNPTQYHVRETQRNQVREYISQSHKDGSKYMVRQLFNPSQSAPTNAGDAFHANS
TPASPLARLNLSTDPMTDIIDDIVSLESSFGDEPRFDRNATTLQTVSPSDLGSFARSSAH
SLPVISNETSSSCPVIKREFTEEDARLFAKDRIKKDNHNIIERRRRYNINDRIRELGHLV
PKSSDPELRWNKGSILKAAVDYIQHLQNDQQKHRALEQRSKQMETMNKKLLLRVQELEMT
VQQYGINVDNSEKQGMMNQLLNFNTAPTAGMTDGMFTAEEEHHVANFPTNAVSPQNRSPG
TLTSQTAEIIVYQQPEQVAPGANTNPDQQFLHQQQQQQQQLLTVDSTIINDQQQPSLSPN
HQMQGNFSPANYNQQSPLGSAASSTLSPTHSEMNMQQQQQQQQQQQTQQQQQEQSNTLNL
NLDEVDMTAFQFPANNDADPLTSIMGGGFSSLLTSEPNQFNDVMMVDDYGLIKDDIFLSD
ANQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtcgcgctaacatgaagatgcagttacaaagggacaaggcccttatggaagag
aagagattaagacaagcttcacaaaatgcagctcaagcctcaaaaagttcttcatcttca
actattaacatgccagttgtaactctaacttctcctccccaactacctgtacaagtgctt
aaggttgagactggcctacagaacccgacccaataccatgttcgtgaaacacaacgtaac
caagttcgtgagtacatcagtcagtctcataaagatggttccaaatacatggtccgccag
ctgttcaacccttcgcaaagcgctcccaccaacgcaggtgacgcattccatgctaacagt
acaccagcgagtcctctagctcgtctcaacttgtccacagacccgatgaccgacataata
gacgacattgtcagccttgagtcaagcttcggagacgagcctcgcttcgaccgtaacgct
acaactctccaaacagtttccccgtctgaccttggaagttttgcccgctcctctgcccat
tccctgcccgttatctccaacgaaacgtcctcatcgtgtcctgtcatcaaacgtgaattt
acggaagaagatgctcgtctcttcgctaaagatcggatcaagaaggacaatcacaatata
attgagcggagacgaaggtacaatataaacgatcgaatacgtgagttgggacacctcgtg
ccaaagtcgtccgacccagaattgcgttggaataaaggttccatactgaaagctgcagta
gattacatacagcacttacaaaacgaccaacagaaacatcgtgcacttgaacaacgaagt
aaacaaatggagacgatgaataagaagttactgttacgagttcaggaactcgaaatgacg
gtacaacagtacggtattaatgttgacaacagcgaaaaacaaggcatgatgaaccagctt
cttaactttaacaccgccccgaccgcgggcatgacggacgggatgttcaccgcagaagag
gaacaccacgtcgcaaatttccccaccaacgccgtctcgccccagaacaggtcgccgggt
acattaacatcacaaacagcggaaataatagtttaccaacagccagagcaggtagcacct
ggtgcaaatacgaaccccgaccagcagtttttacaccaacaacaacaacaacaacaacag
ttattgacggtcgactccacaatcatcaacgaccaacaacagccaagtctctcccctaac
catcagatgcagggtaacttctcccctgctaactataaccagcaatcacctttgggcagt
gcagcttctagcactctctcgccaacacacagtgaaatgaacatgcaacaacaacaacaa
cagcaacaacagcaacaaacacaacagcaacaacaagaacagtccaacacattaaattta
aatcttgacgaagtagatatgacagcgtttcaatttcccgcaaataacgatgccgatcca
ctaaccagtataatggggggcgggttcagctccttgctgacttcagagccaaatcagttt
aatgacgtcatgatggtggacgattacggtcttataaaagacgatatatttctgtccgat
gctaaccagtga
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