Ciona intestinalis (yellow sea squirt): 778954
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Entry
778954 CDS
T01056
Name
(RefSeq) vascular endothelial growth factor receptor 1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cin01001
]
778954
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
778954
Protein kinases [BR:
cin01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
778954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
Ig_4
C2-set
Receptor_2B4
Ig_5
Motif
Other DBs
NCBI-GeneID:
778954
NCBI-ProteinID:
XP_009860892
LinkDB
All DBs
Position
14:complement(2825307..2837286)
Genome browser
AA seq
1096 aa
AA seq
DB search
MKLTVQLVLILCAACSLCAQNPDKVVKKIRQLQTGEPFRIRCRIEVSNTTIDNKLISWNM
PPSVRERGNFRITTEKYETLNGIRYVKNSIKLSSVTVDDMGYYYCEENPLIQDTSMVKNK
QRELTYVYVFDPNILLAPAPRMVDARIYSDLIIPCRPTHKNAVVNLTMVPSDIHPKRISY
DPTVGFTVYNVTDYDAGFWKCKATFRSEEEEKRIVVNVNTDVVPITRGLKAVARQTEVLK
GGQISVTCSVTVSRFWAVAPTWKTPNNRTKVPIFKKCVEEVAGESTDSNTIKWCSTLLIE
HASLLDSGKYSCHLLSNVRTESSVNIKVYEKSFINVLSTPTTSSNVIEVIKGEMAAIKYS
VHAFPTPTFNWFNGTQSISRSSISTTTQLSNDSRVSTNGSTLLIKNVKFSDSGWYMLSVS
VKNLMINETFLLIVQDPLPARIENLDPFINADIGDDVLLSCNTTGQPAPTVTWYHEDIIV
QESKLSELMIRRVKQVDGGVYICVAENQYGKDNKSVSLNIQGDHQMQIMFAASGVSCLVL
ILACGLIAMRLRKKVKHEKCMSALLNIKDMPLEEQAQCSEYDSKKWEFPRDRLRFGKTLG
RGAFGKVIQATAFDLEKSSSCKTVAVKMLKVGSRSNEYRALMTELRILIHLGPHLNIVNL
LGACTTKEGPLMVIVEYCRHGNLSNYLRGLRHCYTGGRSDDTSKQEIKKQRLMSDDSADD
GAFSGTDETDRSSWITDKRGSRASYLSGTGSLTSHEGDIRSHTRLSSGCEDSRMNLEKHH
EANDDGDEKGKEQKDQLTLTDLLSYSLQVARGMEFLASKKCIHRDLAARNVLLSDYQVVK
ICDFGLARDIYKDPDYVRSGGDARLPIKWMAPESIFDKVYSNKSDVWSFGVLLWEIFTLG
GSPYPGLQMDEDFCNKLRRGVRMGKPEHATDSVYSAMLGCWDNNPEDRPTFTKLCEEISD
VLQEEAGHEYLDVLKIFEKEAEGKETLRGLRLYETPQETFTEGKNKMEEETSATINYTFV
KVEDKENEETADETCEEISIVCDTVEANEIEENTYDDDIDEHNDPISDPQACVVLMDQDQ
PPLYEDVIASRIQDLN
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaactgtccaacttgttctgatcttgtgcgccgcttgctcgctctgtgcacaa
aatccagacaaagtcgtaaaaaagatcaggcaactgcaaacaggcgaaccgtttcgtatt
cgttgccgcattgaggtgtctaatacaaccatcgacaacaaactgatatcatggaatatg
ccaccttcagttagagagcggggaaatttccgaatcactactgagaaatacgaaactttg
aatggtatccgttatgtcaagaatagcataaaactgtcgtcagtaactgtagatgatatg
ggctattattactgcgaggaaaacccgttgatacaagatacttccatggttaaaaacaag
caaagggaattaacatatgtatatgtcttcgacccaaatatccttcttgcacccgcaccc
cgaatggtcgatgctagaatatacagcgatttgattataccgtgcagaccgacgcataag
aatgccgttgtgaatttgacaatggtgccctcagatattcatccaaaaaggatatcctat
gacccaactgttgggtttactgtctataacgtcaccgactatgatgcaggcttttggaaa
tgcaaagcaacctttcgaagcgaagaagaagaaaaacgaatcgttgtgaatgtaaacaca
gatgtagtaccaattacacgcggattgaaagcagttgcgcgccaaaccgaagttttgaaa
gggggacaaatttcagtaacttgctcggtaaccgtgagcagattttgggcggtagcgcca
acatggaaaacaccaaacaaccgaaccaaggtgccaatatttaagaaatgtgtagaagaa
gtagcaggtgaaagtacagacagcaacacaataaagtggtgcagtactttgctaatagaa
catgccagtcttcttgattctggcaaatattcgtgtcatttgttaagcaatgtgagaaca
gaaagctctgtcaacattaaagtatatgaaaaatcctttataaatgtcttgtcaactccc
accacaagttcgaatgtgattgaagttataaaaggagaaatggcagccatcaaatacagc
gtccatgcctttcctacacccacattcaattggttcaatggcacacaaagcatttccaga
agttcaatctcaaccaccacacagttatccaatgacagccgtgtctcaaccaatggaagc
actttgctgataaagaatgtcaagttttcagactctgggtggtacatgctttcagtttct
gtgaaaaacttaatgataaatgaaacctttcttctaattgttcaagatcccctcccagca
aggatagaaaatcttgatccgtttataaatgctgacattggtgatgatgtattgttgagt
tgtaacacaacagggcaaccggcaccaacagttacatggtatcatgaagacataattgta
caagaatcgaagctcagtgaactaatgatcagaagagtaaaacaagttgatggaggtgtt
tatatttgtgttgcggagaatcaatatgggaaggataacaaatctgtttctttgaacata
caaggtgatcatcaaatgcaaatcatgtttgcagccagcggtgtctcgtgtcttgtgtta
attctcgcatgtggtttaattgcaatgagacttagaaaaaaggtgaaacacgaaaaatgt
atgtcagcgttgctcaacattaaggacatgccacttgaggagcaagcccagtgttcagag
tacgacagcaagaaatgggagtttcctcgagatcgactcaggtttgggaaaactcttgga
agaggagcattcggaaaagttatccaagctactgcgtttgatctcgaaaaatcatcttcc
tgcaagacagtggctgtgaaaatgctcaaagttggatctcgaagcaatgaatatcgagcc
ctgatgaccgagcttcgaattctgattcatttaggacctcacttgaacattgttaacctg
cttggggcttgtactaccaaagaaggtccgctcatggtgattgtcgagtattgtcgccat
ggtaacttatccaactatcttcgtgggttgagacattgttacacgggtggtagaagtgat
gacacaagtaaacaggagataaaaaaacaacgacttatgagcgatgactcagcagatgac
ggagcgttttctggcacagacgaaactgaccgctcaagttggattacagataagagagga
agtcgcgcatcgtatttgagcggaactggatccttaacgtcacatgaaggagatattagg
agtcacacaagactatcatctggttgcgaagacagcaggatgaacttggagaaacatcat
gaagcaaatgatgatggagatgagaagggcaaagaacagaaggatcaactcactcttacc
gatcttctttcatacagtcttcaagtcgcccgcggcatggagtttctcgcttctaaaaaa
tgcatacatcgagacctggcagcaaggaatgtcttgctttccgattaccaagttgttaag
atttgtgactttgggcttgcacgtgatatttataaagatccagactatgttaggagtggg
ggggacgcaagactgccaatcaaatggatggcaccagagtccattttcgataaagtttac
tccaacaaaagtgatgtttggtcgtttggagttcttctgtgggagatatttacacttggt
ggttccccttaccctggattgcaaatggatgaagatttctgcaacaaactgcgaagaggt
gttcgcatggggaaacctgaacatgccacagactctgtatattctgccatgcttggttgt
tgggataacaatcctgaagatcggccgacattcaccaagttatgcgaggaaataagtgat
gtcctgcaagaagaagccggccatgaatatctggatgtgttaaaaatatttgagaaagaa
gcagaaggtaaagaaactctgcgtgggctccgactctatgaaacacctcaagaaactttt
actgaaggtaaaaacaaaatggaggaagaaacatctgcaacaattaactacacctttgtt
aaggttgaagataaagagaatgaagaaactgcagatgaaacttgtgaagaaatatcaatt
gtttgcgacacagtggaagcaaatgaaattgaagaaaatacatatgatgatgatattgat
gaacataatgatcccatcagtgatcctcaagcttgtgtcgtcctcatggatcaagatcaa
cctccactatatgaagatgtcattgcttccaggattcaggatctcaattaa
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