Clostridium intestinale: HZF06_13520
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Entry
HZF06_13520 CDS
T08934
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cint
Clostridium intestinale
Pathway
cint03030
DNA replication
cint03410
Base excision repair
cint03420
Nucleotide excision repair
cint03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZF06_13520 (polA)
03410 Base excision repair
HZF06_13520 (polA)
03420 Nucleotide excision repair
HZF06_13520 (polA)
03440 Homologous recombination
HZF06_13520 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cint03032
]
HZF06_13520 (polA)
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_13520 (polA)
Enzymes [BR:
cint01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZF06_13520 (polA)
DNA replication proteins [BR:
cint03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HZF06_13520 (polA)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HZF06_13520 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZF06_13520 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
MCCA_BT
Sina_TRAF
HHH
Motif
Other DBs
NCBI-ProteinID:
QLY78109
UniProt:
A0A7D6VNM5
LinkDB
All DBs
Position
complement(2689193..2691799)
Genome browser
AA seq
868 aa
AA seq
DB search
MKKILLIDSNSLMNRAFYALPPLTNSDGIHTNAIYGFTNMILKIQDEIVPDYIIATFDRK
APTFRHNEYAEYKAGRKKMPPELAEQFPLTKELLSYLGIPIFELDGFEADDLLGTLSKKA
EEDNIEVYVLTGDKDALQLASDTTNIIITKKGVSEKEVYNRQRMQDDFGVTPLEFIDVKG
LMGDKSDNIPGVPGIGEKTAYKLIQTYGSVEGVLNNIADISGKKIKDNLETYSEQAIFSK
KLATIMRDVPIEFSWDEALHNENIDKRKVRELLIKLEMKSLLGRFQEENILEEKEDINSQ
TITTISDFKNLMDKISKDVYIISELIEENVFSKININRLYLSSNNEIFIIECLKMENENS
EEYVKALKLLFENEQIKKYSYRIKNTLTVLRKFKVEPKGIEFDVELAAYIIDSSKGKYPL
ESLLEKYLNKGIKAEGEEEKVFEAYNLKNLVDMLREKLKEDEMEDLYYNVELPLANVLSS
MEAEGFNINKTMLEELSVSFKKEIDEKGNKIYELAGEEFNINSPKQLGKILFEKLDLPPV
KKTKTGYSTNAEVLEKLVDKHPIIKEITYYRQITKIYSTYIEGLKAVIDEDGGIHSSFNQ
TVTTTGRLSSTEPNLQNIPIKYEMGRAIRKVFIPKEKEDVLISADYSQIELRVLAHMAED
ENMLHAFRENIDIHTKTASEVFKVPLDDVTKLMRGRAKAVNFGIVYGISDFSLSQDLGIT
KKEAAEYMQIYFDRYPKIQGFLHEVTEKAKEFGYVLTILNRRRFIPEILSSNKILKALGE
RLAMNAPIQGSAADIIKIAMIRVYEKLKENGLKSKLILQVHDELILNVKPDELEEVKELV
KNEMEHVLELNVPLEVDVNIGDTWYDAK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattttacttatagatagtaattcacttatgaatagagcattttatgcattg
ccaccacttactaatagcgatggtatccatactaacgccatatatggatttactaatatg
attttgaaaatacaggatgaaatagtcccagattatataatagcaacttttgatagaaaa
gcaccaacctttaggcataatgagtatgcagaatataaggcaggaagaaaaaaaatgcca
ccagaacttgcagaacaatttcctttaactaaggaactacttagttatttagggatacct
atatttgaattagatggatttgaggcagatgaccttttaggtaccttatctaaaaaagca
gaagaagacaatatagaagtatatgttttaactggagataaggatgcacttcaattagca
tctgataccacaaatataataattactaaaaaaggtgtatctgaaaaggaagtttataat
agacaaagaatgcaggatgattttggagttacacctttagaatttatagatgtaaaagga
cttatgggcgataagtcggataatataccaggggttcctggaataggagaaaaaacagct
tacaaattaattcagacctacggaagtgtagaaggtgtattaaacaatatagctgatatt
tcaggtaaaaaaataaaagataatttagaaacttacagtgaacaggctattttcagtaaa
aagcttgcaactattatgagggatgtacctatagaattttcttgggatgaagctcttcat
aatgaaaatatagataagagaaaagttagagaattactaattaagctcgaaatgaagtct
cttttaggtagatttcaagaagagaatatattagaagaaaaagaggatattaattctcaa
actataaccacaatatcagattttaaaaacttaatggataaaatatcaaaagatgtttat
ataatatctgaacttatagaagagaatgttttttcgaaaattaatataaataggctttac
ttaagttctaacaatgaaatttttattatagaatgtttaaagatggagaatgaaaattca
gaagaatatgttaaagcacttaaacttctttttgaaaatgaacaaataaaaaaatattcc
tatagaataaaaaacactttaacagttttaagaaaatttaaagttgaacctaaaggcata
gaatttgatgttgagttagcagcttatataatagattcatcaaaaggtaaatatccttta
gaaagccttttagaaaaatacttaaataaaggaattaaagcagagggtgaagaagagaag
gtttttgaggcttataatcttaaaaacctagttgatatgttaagagagaagctaaaagaa
gatgaaatggaggatctttactataatgtagagttaccacttgcaaatgtactatcttct
atggaagctgaaggttttaatataaataaaacaatgttagaagaattgtcagtttcattt
aaaaaagaaatagatgaaaaaggaaataaaatctatgagctagcaggtgaagagtttaat
ataaattctccaaagcagttaggtaaaatactatttgaaaaactagaccttcctccagtt
aagaaaacaaaaactgggtattcaactaatgcagaggttttagaaaaattagtagataaa
cacccaattataaaagaaataacatattatagacaaataacaaagatatactcaacttat
attgaagggttaaaagctgttattgacgaagatggaggaatacattcaagctttaatcag
acagttacaacaacaggaaggttaagttcaacagaacctaatctacaaaacattcctata
aaatatgaaatgggtagagctataagaaaagtatttattcctaaagagaaggaagatgtt
cttatatcagctgactattctcaaatagagttaagagttttagcacacatggcagaagat
gaaaatatgcttcacgcttttagagaaaatatagatattcatactaaaactgcttcagaa
gtttttaaagttccattagatgatgtaactaaacttatgaggggaagagcaaaagctgtt
aactttggaatagtatacggaatttcagatttttctttatctcaagatttagggataacg
aaaaaagaagctgcagagtatatgcagatatattttgatagatatcctaagatacaggga
tttcttcatgaggtaacggaaaaagctaaagagtttggatatgtattaacaattttaaat
cgtagaaggtttataccagaaatactatcttctaataaaatattaaaagctttaggggaa
agattggcaatgaatgcacctatacaaggaagtgctgctgatattataaaaatagctatg
ataagagtttatgaaaaacttaaagaaaatggacttaagagtaaacttatacttcaggtt
catgatgaacttatattaaatgttaaaccagatgaactagaagaagttaaggaactagtt
aaaaatgaaatggagcatgtattagaattaaatgttccgcttgaagttgatgtaaatata
ggtgacacttggtatgatgcaaaatag
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