KEGG T02983: 102611701

Citrus sinensis (Valencia orange): 102611701

Entry

102611701         CDS       T02983

Name

(RefSeq) DNA-directed RNA polymerase I subunit 2

K03002

DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102611701
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102611701
Enzymes [BR:cit01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     102611701
Transcription machinery [BR:cit03021]
Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     102611701

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2

Other DBs

NCBI-GeneID:

102611701

NCBI-ProteinID:

XP_052300224

LinkDB

Position

7:complement(join(28406927..28407340,28407441..28407698,28408250..28408462,28409002..28409145,28409251..28409379,28409632..28409707,28409784..28409887,28410663..28410737,28410840..28411004,28411143..28411307,28411385..28411626,28413099..28413178,28413261..28413388,28413900..28414015,28414367..28414454,28415058..28415175,28415305..28415378,28415560..28415612,28415694..28415874,28416443..28416488,28416574..28416651,28417310..28417380,28417664..28417727,28418318..28418394,28418646..28418771,28418877..28418959,28419193..28419352))

AA seq 1175 aa
MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE
IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV
MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR
DRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDT
NDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQ
PVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSL
QNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSK
QIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTT
SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVL
IGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDL
EVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDG
GDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKF
RADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVD
RGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEP
YCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSS
RHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKF
MDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIF
IGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYL
LHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSK
GMETVAMPYVFRYLAAELAAMNIKITLQLGDGATA

NT seq 3528 nt +upstreamnt +downstreamnt
atggcgagaaagaagtcagcggactttgagccgctgcgcgagctcgtgaggcaccacata
gagtcgttcgactacatgctggatgaaggattgagcgagatgtttgatcacgtcaagact
gtcttcgtccacgattccttcaccaataagaggctcaaaatctcagtgggtaacccagaa
atattcccgccgcaaaaggaacaggggtctaaaacattgcgagatgcattgcttcctttt
gaatgtcgccaggcaaaaatttcatatactgggaagttgatggcagatgttgaatttcaa
tatcttgatgcgggttctcctgttgtaagagagaggtttaattttggccagtttcctgta
atgttgaagacaagacgctgtcatttacaaggtgctgattcccaaaaattagtatctctc
aaagaggaagcagcggaaatgggtggttacttcattctcaatgggcttgagagagttttt
cgatcagtaatattgccgaagcaaaactatccaatgagcatggtgcggagttcttttcgt
gatcggcgggaaggatatactgataaggcagttgttataaggtgtgtaagaaaagatcaa
tcttctgtaactcttaaattgtattaccttcttaacggaagtgtaagacttggattttgg
ttgcaagggaaggaatacctgcttccagtgggcattgttctgaaggcccttgttgacact
aatgatcttgaaatttttaatcatttgacgtgctgctatgacgaaaaatataagaaggaa
aagggagctgttggctcaccgctagtaagtgaaagggtaaaaattattctcgctgaagtc
caggacttgtctcttacaactcgtcttcagtgcttgcagcatattggtgagcacttccaa
ccggttattgatggactccaaagcgaaagttactatgctgttgctgaaactgttataaga
gactacatctttgttcacctcaatgacaataacgacaaattcaatctgctcatctttatg
ttgcagaaacttttctcacttgtcgatcatacttctgtgtcggacaatccagattccctg
cagaatcaggaaattttacttcctggtcacttgatcaccatttatctcaaggagaaacta
gaggactggcttcggaaggggaagaagctaattcaagatgagatagagaataatggcaaa
aaatttgacttcttcaacttagccaatatcaagaaggtcatggagaaaaatccttcgaag
caaattggtacaagtattgagacgatgttgaaaactggaagattagcaactcagacaggt
ctagatttgcaacagagggctggctacacagttcaggcagagaggcttaactttctacgt
ttcatctcattttttcgggctgtccatcgaggggcttcatttgccgggctccgtacaaca
agtgtgagaaaattgctacccgaatcttggggtttcctttgccctgtgcatacgcctgat
ggggagccatgtgggttgctgaaccatatgacttccacttgtcgagttgcatcatactat
gattcccgaggaaatatcagagatttttcaaagatgagaacgtctattctcagggttctg
attggggttgggatgataccttcattgccaaagcttgttaaatctggtcctcctgcagtt
ctctctgttcttctagatggccgtgttgttggtgttataccttcaagtgaaattgagaaa
gttgttgctcatttacggagactgaaagtttcagctgcttcagtgattcctgatgatcta
gaagtgggatatgttcctttgagcctgggtggagcttatcctggtttgtacctgttcaca
tctcctcctaaatttgttcgccctgtcagaaatatttctctcccttcggaggaaagtcaa
aacatcgaattaattgggccatttgagcaggtcttcatggagataaggtgtcctgatggt
ggagatggtggaagaagaaatgcatttcctgcaactcatgaagaaattcatcccactggg
atgctaagtgtggttgctaatctaacaccttattccgatcataatcagagcccacgaaat
atgtatcagtgtcagatggcaaaacaaacaatgggtttctctgtacaagcacttaaattc
cgtgctgatcagaaactttaccaccttcagactcctcaaactcccattgttcgcactaac
acttatacaaaatacagcatagatgaatatccaactgggacaaacgcaatagttgcagtt
ctggcttacactgggtatgatatggaggatgctatgatcttgaataagtcatcagtagac
cgtgggatgtgccatggacaaatataccagacggaaacaattgacttatctgatgacggc
aataaggtagatcgaggccagaaactatttagacgaaacaaagatgctaaatcactgcat
tctgtgattgattcagatggacttccgtatgttggacagatgatacatccgggtgaaccc
tattgtagcatctacgataagacaacaaattcttggagaaccaacagccgaaagggttca
gaatctgtgtttgttgactatgttgctgtcgatatgaaaaatagcaagaatcttcctcag
aaggcgaatatacgttttcgacatactagaaaccctatcattggtgataaatttagcagc
agacacggacagaaaggtgtctgctctcagttgtggcctgatattgatatgccattttct
ggagtcacgggaatgcgtccagatctgattatcaatcctcatgcatttccttcgaggatg
acaattgcaatgcttttggagtctgttgccgctaagggaggtagcttacatggaaaattt
atggatgcaacaccatttgcaaattcagtcaagaaaactaatggagatactgggactgat
gaatcaaaatcactagttgatgaactcggtgaaatgttaaggacatgtgggtttaattat
catggtgtagaggtattgtatagtggggtatatggaacagagctcacatgtgaaattttt
attgggcctgtctattatcagcggctccggcacatggtttcagacaaatttcaggttcgc
tccactggaacgatggaccaaattacccggcagccaataaaaggaagaaagcgcggtgga
ggtattcgttttggagaaatggaacgagattcattgcttgctcatggagcagcatatttg
ttgcacgataggcttcacacatgttctgattaccatgttgctgatgtgtgttccctctgt
ggaagtgttcttacagcaacatttatacacccacaaaagcgggcaatacgagagattggc
gggctaccccctgcaagagctcccaagaaagtcacttgtcatgcttgccagacaagtaaa
ggcatggagactgttgcaatgccctatgtttttagatacttggcagctgaacttgctgct
atgaacattaaaataacccttcagctaggtgacggagccacggcctga

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