Citrus sinensis (Valencia orange): 102612811
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Entry
102612811 CDS
T02983
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03020
RNA polymerase
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102612811
09124 Replication and repair
03420 Nucleotide excision repair
102612811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102612811
03400 DNA repair and recombination proteins [BR:
cit03400
]
102612811
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102612811
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102612811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
102612811
NCBI-ProteinID:
XP_006487022
UniProt:
A0A067F124
LinkDB
All DBs
Position
8:join(2719068..2719516,2720637..2720874,2721959..2722231)
Genome browser
AA seq
319 aa
AA seq
DB search
MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTY
DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgcgtcgtaccagcgattcccgaaggtcaaaatccgcgagctcaaagacgac
tacgccaaattcgagctccgggacaccgacgcctccatggccaacgcgcttcggcgcgtg
atgatcgctgaggtccccaccatcgccatcgacctcgtcgaaatcgaggtcaactcctcc
gtcctcaacgacgagttcatcgctcaccgcctcggcctcattcccctcaccagcgaacgc
gccatgagcatgcgcttctcacgtgactgcgacgcctgtgacggtgacggccagtgcgag
ttttgctcggtcgagttccacttgagagccaagtgtcactccgaccagaccttggatgtc
accagtaaggatttgtacagttccgatcattcggttgttcccgtcgattttgttgatcct
gctggctacgattccacggatcagcaaagggggattatcattgtaaagttgcgtcgtggg
caagaattgaggctgagagcaatagccaggaaggggatcggcaaagatcatgcaaaatgg
tcacctgctgcaactgttacattcatgtatgaaccggagatccacatcaatgaagatttg
atggaatctctttcacttgaggaaaaacaaagctgggttgaaagtagccctaccaaagtg
tttgacattgatcctaatactggacaggtttatgtggtcgatgctgaggcatacacttat
gatgatgaagtgataaagaaagccgaggctatgggaaaaccaggactcgtggagatctat
gccaaagaagatagttttatattcactgttgaatctactggtgcaattaaagcgtctcag
ctggtactgaatgccatagaagtcctgaagcaaaagctggatgcagttcgcctctctgag
gacacagtagaagctgatgatcagtttggtgaacttggagcacatatgcgaggaggatga
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