Citrus sinensis (Valencia orange): 102624070
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Entry
102624070 CDS
T02983
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102624070
Enzymes [BR:
cit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
102624070
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
102624070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_11
MTS
PrmA
Ubie_methyltran
UPF0020
Methyltransf_23
DREV
GidB
Methyltransf_32
CMAS
BpsA_C
Spermine_synth
Methyltransf_4
MetW
Motif
Other DBs
NCBI-GeneID:
102624070
NCBI-ProteinID:
XP_006466875
LinkDB
All DBs
Position
7:join(1882313..1882726,1882819..1883604)
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AA seq
399 aa
AA seq
DB search
MLRKTRSTPLSLTRFIYLYQQQRAVRQLGTKPSNRCTHKNKDDDKKIHSPIKHQEDYIFF
HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM
VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS
ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR
PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQKGPNNENFVSDDG
CHSGEDDDDEEASGVDDLCSSSCSEMEMSLFKEKIIQVLKSAAFEDKRPCKLSNEELLHL
LSLFNQVGIYFHDKTVPNNADDAAAAAAAYSSQQQFPFV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcaagacaagatcaactccactgtctctgactcgattcatttacctttaccag
cagcaacgagctgtcagacaacttggtacaaagccaagtaatcgatgcactcacaaaaac
aaagacgatgacaaaaagatccatagcccaattaaacatcaagaagattacatatttttc
cacaaaagcaagggccaacacatcctcaccaaccaacgagtcctcgactctattgttcga
aaatctagcattaacccagacgacaccgtcttagaaatcggacccggtaccggaaatctc
actctcaagcttcttgaagtttccaaaaaggttcacgcaattgaaatcgacgagagaatg
gttgaaattctcaacagacgggcagctgatagcgggtttcatgatcggctcaatgttata
agtaaagatgcattgaagaccgagtttccccaatttgatcttgtcgtggcgaacattcct
tatggaatatcttctcctcttgtggctaaattagtgtatggaacgaagtcgtttaggagc
gcgacgcttcttcttcaaaaggagtttgcaaggaggttgttggcgagtcctggtgactct
gagtttaacagattggctgtgaatgttaagttggtggctgatgtggagtttgttatggat
gtaagcaagagggactttcttccttgcccgaaagttgattcatctgttgtaataatcagg
ccaaaagctgaaataccggatgtgaatcttgatgaatggcgggcttttactaggacttgt
tttagcaagaaaaacaaaacacttggcgcgacgtttaagcagaagaagaaagtgatcgag
ctcttgagattgtccaaacagaagggtccgaataacgaaaattttgtaagtgatgatggt
tgtcattctggggaagatgacgatgatgaggaggcgagtggtgttgacgacttgtgttca
tcttcttgctcagaaatggaaatgagcttgtttaaggaaaagattatccaggttctaaaa
tctgcggcgtttgaggataagaggccttgcaagctgtctaacgaggagttgctgcatttg
ctttccttgtttaatcaagttggaatttactttcacgacaaaacagtgccaaataatgcg
gacgatgcagctgctgctgctgctgcatacagttcacagcaacagtttccttttgtttaa
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