Citrus sinensis (Valencia orange): 102629347
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Entry
102629347 CDS
T02983
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03022
Basal transcription factors
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102629347
09124 Replication and repair
03420 Nucleotide excision repair
102629347
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cit01001
]
102629347
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102629347
03019 Messenger RNA biogenesis [BR:
cit03019
]
102629347
03400 DNA repair and recombination proteins [BR:
cit03400
]
102629347
Enzymes [BR:
cit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
102629347
2.7.11.23 [RNA-polymerase]-subunit kinase
102629347
Protein kinases [BR:
cit01001
]
Serine/threonine kinases: CMGC group
CDK family
102629347
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102629347
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
102629347
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102629347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
102629347
NCBI-ProteinID:
XP_006490716
LinkDB
All DBs
Position
1:join(15303967..15304071,15304724..15305022,15305110..15305218,15306316..15306441,15307465..15307700,15307771..15308085,15312857..15312914)
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AA seq
415 aa
AA seq
DB search
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT
LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA
YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP
TEPNKLPRPATKRASKASDFKPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG
ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINSADRSHLKRKLDLEFQHPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcgatttgtcgaagaaagtcgctgatagatacctgaaacgtgaggttctt
ggtgaaggtacatacggtgtcgtttacaaagccattgatactaagacaggacagactgtt
gctataaaaaaaattcggcttgggaagcaaaaggagggggtgaattttacagcactaaga
gaaataaagctgctgaaagaacttaaaagtccacatataattgagttgattgatgcattc
cctcacaaggggaacttgcatcttgtttttgagtttatggagactgacctcgaaacggtt
attcgcaataccaatatatttctctcaccagctgacataaaatcatatatgcagatgacc
ttgaaaggacttgctttttgtcacaagaaatgggttttgcatagggatatgaaaccaaat
aacctgttgataggatcccatggacagcttaaacttgctgattttggtttagcacgtata
tttgggagtccggatcgtaggtttacgcaccaggtctttgctcgatggtacagagctcct
gagctattatttggtgccaagcagtatggtgctggtgtggatgtttgggctgcaggatgt
atatttgctgagcttctcaatcgtcggccatttctgcagggttcaagtgacattgatcaa
ttaggaaagatcttcgcagcatttgggactgccacaccatcgcaatggcctgatttagca
taccttcctgattatgtggaataccaatatgttgctgcaccccctttgcgttcattgttt
ccgtcagctagtgatgatgctctagatctgttatcaaagatgtttacatatgacccaaaa
gctagaattactgcacagcaggcattagagcacaggtacttctcttctgcaccactgcct
acggagccaaacaagcttcctagaccagcaactaagcgggcatctaaggcttcagatttt
aaacctcaggagggtcctactgtgctttcacctccaagaaagacaaggagagtgatgcca
gaccgtgaagggtttgaagggaatgctaatcgaactgataagattgaggagcatgctggt
gaaacaaagaatgcagatggtgagattgctggaaggaatgagcaagtgccaacgtcagta
gatttttcaatctttgctgcaagacctccaagtagacctacaattaacagtgccgacaga
tctcatctgaaaaggaagctagatcttgaattccaacaccctgagtaa
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