Citrobacter sp. XT1-2-2: M4I31_00620
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Entry
M4I31_00620 CDS
T09034
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix00540
Lipopolysaccharide biosynthesis
cix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M4I31_00620 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cix01005
]
M4I31_00620 (rfaF)
Enzymes [BR:
cix01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
M4I31_00620 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
cix01005
]
Core region
M4I31_00620 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UQX59506
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Position
complement(125868..126914)
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIAMPLG
HGALEIGERRKLGHSLRERRYDRAWVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDA
RVLDKEAWPLMVERYVALAYDKGVMLTAKDLPQPLLWPQLQVSEGEKSLTCSQFSLSAER
PIIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGHQIVLFGSAKDHEAGNEILATLSLEQQ
SWCRNLAGETQLEQAVILLAACKAVVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
KARVVRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNDLLLQEEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtgatcggcccgtcatgggtgggcgacatgatgatgtcgcaaagtctc
tatcgcacgctcaaggcgcgctatccccaggcgataatcgacgtgatggcaccggcgtgg
tgccgtccgctgctgtcgcgtatgcctgaagtcaacgaagccatcgccatgccgctggga
cacggcgcgctggagatcggcgagcgccgtaagctcggtcatagcctgcgtgaaagacgc
tatgatcgcgcctgggtgctgccgaattcttttaaatccgctctggtgccgttttttgct
ggcatcccccatcgtaccggctggcgtggcgagatgcgctacggcctgctaaacgatgcg
cgcgtgctggataaagaagcatggccgttgatggtcgagcgctatgtggctctggcctat
gataaaggcgtgatgctgacggccaaagatttgccgcagcctctgctatggccgcagttg
caggtcagcgaaggtgaaaaatccctgacctgtagtcagttctctctttctgccgaacgc
cccatcatcggtttttgccctggtgcggaatttggtccggcgaaacgctggccgcattac
cactatgcggaactggcgaaacaattaatcgatgaaggccatcagattgtgttgtttggc
tctgcaaaagaccacgaagccggaaatgagatcctcgctacgctgagccttgaacagcag
tcctggtgccgcaatctggcgggtgagacacagctggagcaggcagtcattcttctcgct
gcctgcaaagcggttgtcaccaatgattctggattaatgcacgttgccgccgcgttgaat
cgacctctggtagcattatatggcccaagtagtccggactttaccccgccgttgtcgcac
aaagcgcgagtcgtccgcctgattacgggctaccacaaagtgcgtaaaggcgatgcagca
gaaggctatcatcagagcctgatcgacattactcctcagcgcgtactggaagaacttaat
gacctgttgttacaagaggaagcctga
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