Callithrix jacchus (white-tufted-ear marmoset): 100388428
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Entry
100388428 CDS
T03264
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100388428 (CDKAL1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100388428 (CDKAL1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100388428 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
100388428
NCBI-ProteinID:
XP_054109665
Ensembl:
ENSCJAG00000007384
LinkDB
All DBs
Position
4:complement(8063614..8848084)
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AA seq
606 aa
AA seq
DB search
MQLLDFGLPSLQNENMPSASCDTLLEDIEDIVSQEDSKPQERHFVRRDVVPKARRRNTQK
YLQEEEDSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWL
LNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVE
VVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKH
ARGNLASYPIDELVDRAKQSFQGPSQRTWEEGVCEIWLTSEDTGAYGRDIGTDLPTLLWK
LVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHVPVQSASDSVLMEMKREY
CVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPR
PGTPAAKIEQVPAQVKKQRTKDLSRVFHSYSPYHHKIGERQQVLVTEESFDSKFYVAHNR
FYEQVLVPKNPAFMGKMVEVDIYESGKHFMKGRPVSDARVYTPSISKPLAKGEVSGLTKE
FRNGLGNHGSPGSHTPAASQHDSASSRMALRMPRRHQDWAPRTAVGLALLALLLAFFVKV
YNLEYN
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccttgacttcggacttcccagcctccagaacgagaatatgccttctgcatcc
tgtgatacactgctggaggacattgaagatatcgtgtctcaggaagattcaaaaccacaa
gaaaggcattttgtaagaagggatgttgtcccaaaggcacgaaggcgaaatacccaaaaa
tatttgcaagaggaggaagacagtccaccaagtgacagcactattccaggcatacagaaa
atttggatacgaacatggggctgttctcataataattcagatggagaatatatggctgga
cagctcgctgcttatggctataaaattacagaaaatgcatcagatgcagatttatggctc
ctgaacagttgcactgtaaaaaacccagctgaagaccactttagaaactcaattaaaaaa
gctcaagaggagaacaagaaaatagtactggctggatgtgttcctcaagcccagcctcgc
caggactaccttaaaggactgagtatcattggggttcaacagatagatcgtgtggtagaa
gttgtggaggaaacaattaaaggtcactctgtgagactgctgggtcagaagaaggataat
ggaaagcggctggggggagcacgactggatttgccaaagattaggaagaatccactgata
gaaatcatttccatcaataccgggtgtctcaatgcttgtacctactgcaaaactaaacat
gccagaggaaatttggccagttacccgattgatgagctagtagacagagccaaacaatct
tttcaaggacccagccagagaacctgggaggagggcgtttgtgagatatggttgaccagt
gaagacacgggggcttacggcagagatattggcaccgatctccccacactcctgtggaaa
ctggttgaagtgattcctgagggagcaatgctgaggcttggcatgacaaatccaccctat
attttagagcatctggaggaaatggcgaaaatccttaatcaccccagagtctacgctttc
ctgcacgtcccagtccagtctgcctccgacagcgtactcatggaaatgaaaagagaatac
tgtgtggctgacttcaaaagagtagtggattttctgaaagagaaagttcctggaataact
attgctacagatattatctgtggttttcctggagaaacagatcaggattttcaagaaaca
gtgaagcttgttgaagagtacaaatttccaagcctctttattaaccagttttaccctcga
ccaggaactcctgctgcaaaaatagaacaagttccagcgcaagtgaaaaagcaaaggaca
aaagatctttctcgggtgtttcattcttacagtccgtatcatcacaagattggtgaaaga
cagcaagtgttagtaacagaagaatcttttgattccaagttttatgttgcacacaatcga
ttctatgagcaggttttagtgccaaagaaccctgcattcatggggaaaatggttgaagtg
gacatctatgaatcaggcaaacattttatgaaagggcgaccagtatcagatgccagagtg
tacacgccttccatcagcaaaccgcttgcaaagggagaagtctcaggtttgacgaaggag
ttcagaaacgggcttgggaaccacgggagtccaggatcccacacccctgctgcctctcag
cacgactcagcgagttccagaatggcgctgcgcatgcccaggcgacatcaagactgggcg
ccgaggacggccgtgggtttggctctgctggctcttcttttggctttttttgtcaaggtc
tataatttagaatacaactaa
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