Callithrix jacchus (white-tufted-ear marmoset): 100392642
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Entry
100392642 CDS
T03264
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00900
Terpenoid backbone biosynthesis
cjc01100
Metabolic pathways
cjc05164
Influenza A
cjc05166
Human T-cell leukemia virus 1 infection
Module
cjc_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100392642 (FDPS)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100392642 (FDPS)
05164 Influenza A
100392642 (FDPS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cjc01006
]
100392642 (FDPS)
Enzymes [BR:
cjc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100392642 (FDPS)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100392642 (FDPS)
Prenyltransferases [BR:
cjc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100392642 (FDPS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100392642
NCBI-ProteinID:
XP_035136253
Ensembl:
ENSCJAG00000008364
LinkDB
All DBs
Position
18:9300085..9314474
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AA seq
419 aa
AA seq
DB search
MPLSRWLRSVGVFLLPAPYWAPRERWLGSLRRPSLVVGYPVLAWHSARCWCQAWTEEPRA
LCSSLRMNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAI
GGKYHRGLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTRRG
QICWYQKPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLD
LITAPQDNVDLDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLE
MGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLQRSTPEQRQILKENYGQKE
AEKVARVKALYEELDLPAVFSKYEEDSYNHIMALIEQYAAPLPPAIFLGLARKIYKRKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtcccgctggttgagatctgtgggggtcttcctgctgccagccccctactgg
gcaccccgggagaggtggctgggttccctacggcggccctccttggtggtcgggtaccca
gtcctggcctggcacagtgcccgctgctggtgccaagcatggacagaggagcctcgagcc
ctttgctcctccctcagaatgaatggagaccagaaatcagatgtttatgcccaagaaaag
caggatttcgttcagcacttctcccagatcgttagggtgctgactgaggatgagatgggg
cacccagagacaggagatgctattgcccggctcaaggaggtcctggagtacaacgccatt
ggaggcaagtatcaccggggtctgacggtgctagtagcgttccgggagctggcggagcca
aggaaacaggatgctgatagtctccagcgggccctgacggtgggctggtgtgtggaactg
ctgcaagctttcttcctggtgacagatgacatcatggattcatccctcacccgccgggga
cagatctgctggtatcagaagccaggtgtgggtctggatgccatcaatgacgctgtcctt
ctggaagcgtgtgtctaccgcctgctgaagctctactgccgggagcagccctattacctg
aacctgatcgagctcttcctgcagagttcctatcagactgagattgggcagaccctggac
ctcatcacagcccctcaggacaatgtggatctcgacagattcactgaaaagaggtacaaa
tccattgtcaagtacaagacggctttctactccttctaccttcctgtagctgcagccatg
tacatggcaggaattgatggcgagaaggagcatgccaatgccaagaagatcctgctggag
atgggagagttctttcagattcaggatgattaccttgacctctttggggaccccagtgtg
actggcaaagttggcactgacatccaggacaacaaatgcagctggctcgtggtccagtgt
ctgcaacggtccactccggaacagcgccagatcctgaaggaaaattacgggcagaaggag
gctgagaaggtggccagagtgaaggcattatatgaggagctggatctgccggctgtgttc
tcgaagtatgaggaagacagttacaaccacattatggctctgattgaacagtacgcagcg
cccctgcccccagctatctttctggggcttgcgcgcaaaatctacaagcggaaaaagtga
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