KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100394075
Entry
100394075         CDS       T03264                                 
Symbol
POLR2H
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03020  RNA polymerase
cjc03420  Nucleotide excision repair
cjc04623  Cytosolic DNA-sensing pathway
cjc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100394075 (POLR2H)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100394075 (POLR2H)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100394075 (POLR2H)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100394075 (POLR2H)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100394075 (POLR2H)
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100394075 (POLR2H)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100394075 (POLR2H)
  RNA polymerase III system
   RNA polymerase III
     100394075 (POLR2H)
  RNA polymerase I system
   RNA polymerase I
     100394075 (POLR2H)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100394075 (POLR2H)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 100394075
NCBI-ProteinID: XP_002758180
LinkDB
Position
15:7088044..7094595
AA seq 195 aa
MRYSCLAAAFLEVLLLISLLHARGCAYSQPWSRVNPFCCSPGPLAMAGILFEDIFDVKDI
DPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEY
NPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGF
EVDSRVYLLMKKLAF
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcgctactcttgtctagctgccgcctttctggaggtgcttttgctcatctcccttctc
cacgcgagggggtgcgcgtactcccagccgtggtcgcgcgttaaccccttctgctgctct
cctggcccacttgcgatggcgggcatcctgtttgaggatattttcgatgtgaaggatatt
gacccagagggcaagaagtttgaccgagtgtctcggctacattgtgagagtgaatctttc
aagatggatctcatcttagatgtaaacattcaaatttaccctgtagacttgggtgacaag
ttccggttggtcatagctagtaccttgtatgaagatggcaccctggatgatggtgaatat
aaccccactgatgacaggccttccagggctgaccaatttgagtatgtaatgtatgggaaa
gtatacaggattgagggagacgaaacttctactgaagcggcaacacgcctctctgcctac
gtgtcctatgggggcctgctcatgaggctgcagggggatgccaacaacctgcatggattt
gaggtggattccagagtttatctgctgatgaagaagctagccttctga

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