Callithrix jacchus (white-tufted-ear marmoset): 100405392
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Entry
100405392 CDS
T03264
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03020
RNA polymerase
cjc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100405392 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100405392 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100405392 (POLR3B)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100405392 (POLR3B)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100405392 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
100405392
NCBI-ProteinID:
XP_002752985
Ensembl:
ENSCJAG00000014985
LinkDB
All DBs
Position
9:105712990..105864027
Genome browser
AA seq
1133 aa
AA seq
DB search
MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIF
KAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGG
PKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVF
LNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
KQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMV
KTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPL
EGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHY
GTAFGGSRVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GKCGLLGYSGWCHFCKSSRQVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctggcggaggagtttgggaacctgacgcccgagcagctggctgcgccgatc
cctactgtagaggaaaaatggaggctgcttccagcatttttaaaggtgaaaggccttgtg
aaacagcatatagattcatttaactattttattaatgtagagataaagaagataatgaaa
gccaatgaaaaggttacaagtgacgctgaccctatgtggtacttaaaatatcttaatatc
tatgttgggctacctgatgttgaagaaagcttcaatgtaactagaccagtgtcccctcat
gagtgccgtttgagggacatgacatactctgcccccattacagtggatattgaatatacc
cgaggcagccagaggattatccgcaatgccttacccatcggcagaatgcccataatgtta
cgtagttcaaactgtgttcttacaggaaaaacgccagcagaatttgccaaactgaatgaa
tgtcctttagatccaggtggctacttcattgttaaaggagtagaaaaagttattcttatc
caagagcagctgtctaagaacaggatcatcgtggaggctgatagaaaaggtgccgttgga
gcttcagttaccagctctacccatgagaaaaaaagcagaaccaatatggctgtgaaacaa
gggcgattttatttgaggcataatactttgtcagaagatatacccattgtcatcatattt
aaggccatgggtgttgagagtgaccaggaaattgtgcagatgattggaactgaggagcac
gtgatggctgcatttgggcccagtctggaagagtgccagaaagctcagattttcacacag
atgcaggcattaaaatatatagggaacaaagtgagaagacaaaggatgtggggaggtgga
ccaaagaaaaccaagatagaagaagcaagagagcttctggcttccaccattctgacccat
gtcccagttaaggaattcaatttccgagccaaatgtatctatactgcagtgatggtgcga
agagtaattctggcccaaggagataataaagttgacgacagagattattacggtaacaag
cgactggaattggcaggacagcttttatctcttctttttgaagacttgttcaaaaaattt
aattctgaaatgaaaaagattgctgaccaggtgattcctaagcagagagcagcccagttt
gatgttgtaaaacacatgcgccaagaccagatcaccaatggcatggtgaacgctatttct
actggaaactggtctctaaagagatttaaaatggaccgccagggtgtgacccaagtgctg
tctcgcttgtcatatatatccgcactgggcatgatgacaagaatctcttcccagtttgaa
aaaacaagaaaagtgagtggtcctcgctccctccagccgtctcagtggggaatgctctgt
ccttcagacactcctgaaggagaggcatgtggcttggttaaaaacctggcccttatgaca
cacatcacaactgatatggaagatggacctattgttaaattagccagtaatttgggagta
gaagatgtgaatttattatgtggggaagagctctcttacccaaatgtgtttcttgtcttt
cttaatggtaacatcttgggtgtcattagagaccataaaaagctagtgaatacatttcga
ctgatgagaagagcaggatatatcaatgaatttgtttccatctcaacaaatcttacagat
cgatgtgtctatatttcttctgatggaggaagactgtgcagaccctatataattgtcaag
aagcagaagccagcagtcacaaataaacatatggaagagctggcccaagggtacaggaat
tttgaagatttcttacatgagagtctggttgaatatttggatgtgaatgaagaaaatgat
tgtaacatcgcactgtatgaacacacaattaataaagacaccacccacttggagattgaa
cccttcactcttcttggcgtgtgtgctggactgatcccataccctcaccataaccagtcc
ccgagaaacacttaccagtgtgccatggggaaacaagccatgggtactataggatacaac
caacgaaacagaattgatactctcatgtatctactcgcatatccacaaaaacccatggtt
aagacaaaaaccattgaattgatagaatttgagaaactgccagctggacagaatgcaaca
gttgctgtgatgagttatagtggctatgatattgaagatgctctcgttttaaacaaggcc
tctttagacagaggctttgggcgttgccttgtatataaaaatgctaaatgtacattgaaa
cgatacaccaatcagacttttgataaagtgatggggcccatgttggatgctgctacaagg
aaacccatctggcgacatgaaatcttagatgcagatggtatttgttctccaggtgagaaa
gtagaaaacaaacaagtgcttgtaaataagtccatgcccacagtgacccaaattcctttg
gaaggaagtaatgtaccgcagcaaccacagtacaaagatgtgcctataacttacaaagga
gcaacagactcatatattgaaaaagtgatgatatcttcaaatgctgaagatgcttttctg
atcaaaatgctgctgagacagacaaggcgtccagagattggagacaaattcagcagtcgt
catgggcaaaaaggtgtttgtggcttgatcgtcccccaggaagacatgccgttttgtgat
tctggcatctgtccggacatcataatgaacccacacggcttcccatcacgaatgacggtg
gggaagctcattgaactgctggctggcaaggctggtgtgctggatggcagattccactac
ggcactgcgtttggaggcagtagagtgaaggatgtgtgtgaggacctcgttcgtcatggt
tataactacttggggaaagactatgttacatctggcatcacaggagagcccttagaagca
tatatctatttcggccctgtgtactatcagaagctgaaacacatggtactggataaaatg
catgcccgagcccggggcccacgagctgtccttaccaggcaacccactgaaggacggtct
cgtgatggtggcttgcgtcttggggaaatggaacgtgactgtttaatcggttatggagcc
agtatgcttttgctagagagactaatgatttcaagtgatgcctttgaggttgatgtctgt
gggaagtgtggccttctcgggtattctggctggtgccatttctgcaagtcatcccgccaa
gtgtcttccctccgtattccgtatgcctgcaagctgctcttccaggaactacagtccatg
aacattatccccaggttaaaactgtccaagtacaatgaatga
DBGET
integrated database retrieval system
