Callithrix jacchus (white-tufted-ear marmoset): 100411011
Help
Entry
100411011 CDS
T03264
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00310
Lysine degradation
cjc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100411011 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100411011 (PRDM6)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100411011 (PRDM6)
Enzymes [BR:
cjc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
100411011 (PRDM6)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100411011 (PRDM6)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100411011 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
100411011
NCBI-ProteinID:
XP_035146891
Ensembl:
ENSCJAG00000017318
LinkDB
All DBs
Position
2:complement(82952472..83053582)
Genome browser
AA seq
588 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGAGPLKGSGAAGPLSAPQPLQPPPPPPPPP
ERAEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAALAGLSALPVSQLPVFAPL
AVAAEPLTHKELCLGAASGPGPAKCGGGGGGDGRGAQRFRCSAEELDYYLYGQQRMEIIP
LNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPRE
VCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGT
LQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDS
YTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLTPATQQRSVVFPQTPCS
RNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRIL
LQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNH
IRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgggagacccaggcggctcggccttcctcaaagtggacccagcctacctg
cagcactggcagcaactcttcccgcacggcggcgccggcccgctcaagggcagcggcgcc
gcaggtcccctgagcgcgccacagcctcttcagccgccgccacctcccccgccgccccca
gagcgcgccgagcctccgccggacagcctgcgcccgcggcccgcctctctgtcctctgcc
tcgtccaccccggcttcctcctccacctccgcctcctccgcctcctcctgcgctgctgcc
gccgcgctggcgggtctctcggccctgccggtgtcgcagctgccggtgttcgcgcctcta
gccgtcgccgccgagccgctgacccacaaggaactgtgcctcggcgccgcctccggcccg
gggcccgccaagtgcggcggcggcggcggcggggatggccgaggcgcccagcgcttccgc
tgcagcgcagaggagctggactattacctgtatggccagcagcgcatggagatcatcccg
ctcaaccagcacactagcgaccccaacaaccgttgcgacatgtgcgctgacaaccgcaat
ggcgagtgcccgatgcacgggccactgcactcgctgcggcggctcgtgggcaccagcagt
gctgcggccgccgcgcccccgccggagctgccggagtggctgcgggacctgcctcgcgag
gtgtgcctctgcaccagcaccgtgcctggcctggcctatggcatctgcgcggcacagagg
atccaacagggcacctggattggacccttccaaggcgtgcttctgccgccagagaaggtg
caggcaggcgccgtgaggaacacgcagcatctctgggagatatatgaccaggatgggaca
ctacagcactttattgatggtggggaacctagtaagtcgagctggatgaggtatatccga
tgtgcaaggcactgcggagaacagaatctaacagtagttcagtacaggtcgaatatattc
taccgagcctgtatagatatccccaggggcaccgagcttctggtgtggtacaatgacagc
tatacgtctttctttgggatccccttacaatgcattgcccaggatgaaaacttaaatgtc
ccttcaacggtaatggaagccatgtgcagacaagatgccctgcagcccttcaacaagagc
agcaaactcacccccgccacccagcagcgctccgttgttttcccccagactccgtgcagc
aggaacttctctctcctggataagtctgggcccattgagtcaggatttaatcaaatcaac
gtgaaaaaccagcgagtccttgcaagtccgacttccacaagccagctccactcggagttc
agtgactggcatctttggaaatgtggtcagtgctttaagactttcacccagcggatcctc
ttacagatgcacgtgtgcacgcagaaccctgacagaccctaccaatgcggccactgctcc
cagtccttttcccaaccttcagagctgaggaaccacgtggtcactcactctagtgaccgg
cctttcaagtgtggctactgtggtcgtgcctttgccggggccaccaccctcaacaaccac
atccgaacccacactggagaaaagcccttcaagtgcgagaggtgtgagaggagcttcacg
caggccacccagctgagccgacaccagcggatgcccaatgagtgcaagccaataaccgag
agcccagaatcaatcgaagtggattaa
DBGET
integrated database retrieval system
