Callithrix jacchus (white-tufted-ear marmoset): 100415679
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Entry
100415679 CDS
T03264
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc05014
Amyotrophic lateral sclerosis
cjc05200
Pathways in cancer
cjc05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100415679 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100415679 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
100415679 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100415679 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100415679 (TPR)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100415679 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF1192
Imm70
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
100415679
NCBI-ProteinID:
XP_017821914
Ensembl:
ENSCJAG00000005872
UniProt:
F7IHS3
LinkDB
All DBs
Position
18:complement(38024197..38084919)
Genome browser
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRPRGRPMASRGFDGSRRGSLRRAGARELPSEETEAAAQASGCSWSSSFFS
ASTPSATAIGARGPTDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHNQERLVNETRECQSLRLELEKLNSQLKTVTEKNKELEIAQD
RSIAIQNQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLE
SALTELEQLRKSRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASGLDDISLASTPKR
PSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNEQLEKLQEQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDAET
NLHLNTKELLKNAQKENATLKQHLGNMEVQLASQSSQRTGKGQPNNKEDVDDLVSRLRQA
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECRASWEERERMLKDEVSKCVCRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVIETNKMLREEKERLEQDLQQTQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKDLDAKIIDI
QEKVRTITQVKKIGRRYKTQYEELKAQQDKVLETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRITALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASISDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPSIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GEGNQRAADSQNSGEGNTVAAESSFTQEVSREQQPSSASERQAPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMSRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtccagaagccgcccaagaggacgacccatggcatcccgg
ggctttgacgggtcccgccgcgggagtctccggcgggctggcgcgcgcgagctgccgagc
gaggagactgaggcggcggcgcaggcttctgggtgctcctggtcttcgtctttcttctcc
gcttccaccccgtcggccactgccattggggctcgtggccccaccgacatggcggcggtg
ttgcagcaagtcctggagcgcacagagctgaacaagctgcccaagtctgtccagaacaaa
cttgaaaagttccttgctgatcagcagtccgagatcgatggcctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtattttgagatagaaaagagactgtcccacaat
caagagagacttgtgaatgaaacccgagagtgtcagagcttgcggcttgagctagagaaa
ctcaacagtcaactgaagacagtaactgagaaaaacaaagaacttgaaattgctcaggat
cgcagtatcgccattcaaaaccagtttacaagaacaaaggaagaattagaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatacttaacagaggat
gttaaacgtctcaacgaaaaacttaaagaaagcaatacaacgaagggtgagcttcagtta
aaattggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaaacgcttggaa
caagaaaaagaattgctgcataatcagaatacatggctgaatacggagttgaaaacaaaa
actgatgaacttttggctcttggaagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaataaaaaagaggaggtttctagactggaagaacagatgaatggcttaaaa
acatcaaatgagcatcttcaaaagcatgtggaggatctgttgaccaaattaaaagaggcc
aaggagcaacaggccagtatggaagagaaattccataacgaattaaatgcacacataaaa
ctttctaacttgtacaagagtgccgctgatgactccgaagcaaagagcaatgaactaacc
cgggcagtggatgaactacacaaacttttgaaagaagctggtgaagccaacaaagcaata
caagatcatcttctagaggtggaggaatctaaagatcaaatggaaaaagaaatgctcgag
aaaatagggaaattggagaaggaattagagaatgcaaatgaccttctttctgccacaaaa
cgtaaaggagccatattatctgaagaagagctcgcagccatgtctcctactgcagcagct
gtagctaaaatagtgaaacctgggatgaaattaactgagctctataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaacaaaagaattaataagtacctagat
gaaatagtgaaagaagtggaagccaaagcaccaattttgaaacgccagcgtgaagaatat
gaacgagcacagaaagctgtagcaagtttatctgttaagcttgaacaagccatgaaggag
attcagcgattgcaggaggacactgataaagccaacaaacattcatctgtacttgagaga
gacaatcaaagaatggaaatacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagcaaggggtaaccatgtaattcgtgatgaggaagtaagctctgct
gatataagtagttcatctgaggtaatatcacagcatctagtatcttacagaaatattgaa
gagcttcaacaacaaaatcagcgtcttttggtggcccttagagagcttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatcactgagcttcagcttaaacttgag
agcgccctcaccgaactagaacaactccgcaaatcacgacagcatcaaatgcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttactgtcacaaacaacaggagtt
gccattccattacaagcttcaggcttggatgatatttctcttgcatcaactccaaaacgt
ccaagtacatcacaaactgtttccactcctgctccagtacctgttattgaatcaacagag
gccatagaggctaaggctgcgcttaaacagttgcaggaaatttttgagaactacaaaaaa
gaaaaagcagaaaatgaaaaaatacaaaatgagcagcttgagaaacttcaagagcaagtt
acagatttgcgatcacaaaataccaaaatttctacccagctagactttgcttctaaacgt
tatgaaatgctgcaagataatgttgaaggatatcgtcgagaaataacatctcttcatgag
agaaatcagaagctcactgcaacgactcaaaagcaagaacagattatcaatacaatgact
caggacttgagaggagcaaatgagaagctagctgtcgcagaagtaagagcagaaaatttg
aagaaggaaaaggaaatgcttaaattgtctgaagttcgtctttctcagcagagagagtct
ttgttagctgaacaaagggggcaaaacttgctgctgactaatctgcaaacaattcaggga
atactggagcgatctgaaacagaaaccaaacaaaggcttagtagccaaatagaaaaattg
gaacatgagatctctcatctaaagaagaagttggaaaatgaggtggaacaaaggcataca
cttacaagaaatctagatgtgcagcttttagatacaaagagacaactggatgcagagaca
aatcttcatcttaacacaaaagaactgttaaaaaatgctcaaaaggaaaatgctacattg
aaacagcacctcggtaatatggaagtccaacttgcttctcagtcttcacagagaactggt
aaaggtcagcctaacaacaaagaagatgtggatgatcttgtgagtcgactaagacaggca
gaagagcaggtgaatgacttaaaggagaggctcaaaacaagtactagcaatgtggaacaa
tatcgagcaatggttactagtttagaagaatccctgaacaaggaaaaacaggtaacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacaattg
gaaaagaagttgatggaagtagagaaggagaaacaagaacttcaggatgataagagaaga
gccatagagagcatggaacaacagttatctgaattgaagaaaacactttctagtgttcag
aatgaagtacaagaagcccttcagagagcaagcacagctttaagtaatgagcagcaagcc
agacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagaga
gaattgatgctgcatgctgctgatgttgaagctctacaagctgcgaaggaacaggtttca
aaaatggcctcagtccgtcagcatttggaagaaacaacccagaaagcagaatcacagtta
ttggagtgcagagcgtcttgggaggaaagagagagaatgttaaaggatgaggtttccaaa
tgtgtatgtcgctgtgaagatctggagaaacaaaacagattacttcatgatcagattgaa
aaattaagtgacaaggtcgttgcctctgtgaaggaaggtgtgcaaggtccactgaatgta
tctctcagtgaagaaggaaaatctcaagaacaaattttggaaattctcagatttatacgg
cgcgaaaaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctgcgttat
cgacaaagggttgaacttttagaaagagagctgcaggaactgcaggatagtctaaatgct
gaaagggagaaagtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaag
aaaactgaaacaatgaatgtagttatagagaccaataaaatgctgagagaagaaaaggag
agattagaacaggatctacagcaaacacaagcaaaggtgaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctgagtgagaaaagtggtatgctacaggcagag
aagaagcttttagaagaggatgtcaaacgttggaaagcacgtaaccagcatctagtaagt
cagcagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
acaaagcgtattcaacagttgacagaagaaattgggagacttaaagctgaaattgcaaga
tcaaatgcatctttgactaacaaccagaacttaattcagagcctgaaggaagatctgaat
aaagtaagaactgaaaaagaaaacatccagaaggacttagatgccaaaataattgatatc
caagaaaaagttagaacgattactcaagtaaagaaaattggacgtaggtacaagactcag
tatgaagaacttaaagcacaacaggataaggttttggagacatcagctcaatcctctgga
gaccatcaagaacagcatgtttcagtccaggagatgcaggaactcaaagaaacgctcaac
caagctgaaacaaaatcaaaatcactcgagagtcaagtagagaatctgcagaagacatta
tctgaaaaagagacagaagcaagaaaccttcaggaacagactgtgcaacttcagtctgaa
ctttcacgacttcgtcaggatcttcaagatagaaccacacaggaggagcagctccgacaa
cagataactgaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaatt
gcgcacctagctggtgtaaaagatcagctaacgaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgtattactgctctgaagtcc
cagtatgaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaataaggtccctgaacagcagagacag
atcacgctgaaaacaactccggcttctggtgaaagaggaattgccagcatatcagatcca
ccaacagccaatattaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctggaaataagtcaacacccagggcaagtatccgcccaatggtcacacctgca
actgttacaaatcccaccactaccccaacagctacagtgatgcccacgacacaagtggaa
tcacaggaagctatgcagtcagaaggccctgtggaacatgttccagtttttggaagcaca
agtggatctgttcgttctactagtcctaatgtccagccttctatctctcaacctatttta
actgttcagcagcaaacacaggctacagcatttgtgcaacccactcaacagagtcatcct
cagattgagcctgccaatcaagagttatctccaagcatagtagaggttgttcagagttca
ccagttgagcggccttctacttccacagcagtatttggcacagtttcggctaccccaagt
tcttctttgccaaagcgtacgcgtgaagaggaagaggatagcaccatagaagcatcagac
caagtctctgatgatacagtggaaatgcctcttccaaagaagttgaaaagtgttacacct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaagtggagactcag
gtatacaaccaggattctcaagattccatcggagaaggagttacccagggagattataca
cctatggaagacagtgaagaaacctctcagtctctacaaatagatcttggaccacttcaa
tcagatcagcaaacaacaacttcatcccaggatggtcaaggcaaaggagatgatgtcatt
gtaattgacagtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggac
tatgaagaggatgaggaagatgatgatgatgatgaagatgacacggggatgggagatgag
ggtgaagatagtaatgaaggaactggtagtgccgatggcaatgatggttatgaagctgat
gacgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaggtaatcagagagctgctgattctcaaaacagtggtgaaggaaatacagttgct
gcagaatcttcttttactcaggaggtttctagagaacaacagccatcatcagcatctgaa
agacaggcccctcgagcacctcagtcaccaaggcgcccaccacatccacttcccccaaga
ctgaccattcatgctccacctcaggagctgggaccaccagttcagagaattcagatgagc
cgaaggcagtctgtaggacgtgggcttcagttgactccaggaataggtggtatgcaacag
catttttttgatgatgaagacagaacagttccaagtactccaactcttgtggtgccacat
cgtactgatggatttgctgaagcaattcattccccacaggttgctggtgtccctagattc
cggtttgggccacctgaagatatgccacaaacaagttctagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtacgaaacaccactgttcctagctcatgaagaa
gagtcaggtggccgaagcgttcccactactccactgcaggtagcagccccagtgactgta
tttactgagagtactacctcagatgcttcggagcatgcctctcagtctgttccaatggtc
actacatccactggcactttatctacaacaaatgaaacagcagcaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccaacaggaagaagagccggttcaagcctctgatgagtcagatctcccctccaccagc
caggatcctccttccagctcatctgtagatactagtagtagtcaaccaaagcctttcaga
cgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
