Coturnix japonica (Japanese quail): 107309025
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Entry
107309025 CDS
T04297
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjo03016
]
107309025 (TRDMT1)
Enzymes [BR:
cjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
107309025 (TRDMT1)
Transfer RNA biogenesis [BR:
cjo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107309025 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
107309025
NCBI-ProteinID:
XP_015708913
LinkDB
All DBs
Position
2:18032745..18071173
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AA seq
415 aa
AA seq
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MDGRHPIAWRHVLPHLRGWNGAVRLVLKGRGLCPWSRHGESCVCAEVVAAVDVNTLANEV
YKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYI
LDILPRLQKLPKYLLLENVKGFESSSARCELLRTLETCGYLYQEFLLSPTCLGIPNSRLR
YFLIAKLHQEPFFFHAPSQILTRFPDQSLEELCKDNVDKASSSFPSGEKSLDSNTDPDCS
SKKGHLPKGAFLFKLETAEEMVRKHNQDNDSSIQMLEDFLEEENEEMSQYFLAPKSLLRY
AFLLDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIESLTEEEKLMKLT
TLKLRYFTPREIANLHGFPPEFGFPDKVSIKQCYRLLGNSLNVRVVAKLISILLG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacggacggcatcccatagcttggaggcacgtcctcccccatcttagaggctggaat
ggggcagtgaggctcgtgttgaaggggagggggctgtgcccatggagcagacacggggaa
agctgcgtgtgtgcagaagttgttgctgctgtggatgtgaacactctcgccaatgaagtt
tataagcataactttcccagcacaccattatgggcaaagacaattgagggtattacactg
aaagaatttgacagattatctttcgatatgattttgatgagtcctccctgtcagccattt
acaagaattggcctacaaggtgatgtgtctgatccgcggacaaagagcttcctttatatt
ctcgatattctcccaaggctccagaagcttccaaaatacctacttttagaaaatgttaaa
ggatttgaatcctcttctgcaagatgtgaacttctgcgaacactagaaacgtgtggatat
ttatatcaagaattcctcttgtctccaacctgtcttggcattcccaattctaggctgcgg
tattttctaattgcaaagcttcaccaagagccatttttctttcatgctcctagtcagata
ttgacaagattcccagatcagagtctagaagagttatgcaaggacaatgttgacaaagct
agttcttcctttccttctggagagaagagtctggattcaaatactgatcctgactgcagc
agcaagaagggacacttaccaaagggggcctttctttttaagcttgaaacagcagaagaa
atggtaaggaagcataatcaggacaatgattcctctattcaaatgttagaagatttcctg
gaagaggaaaatgaagaaatgagtcagtattttttagcacccaagtccttgttacgctac
gctttcttgttagacatcgttaaacctacttgccggagatccacatgctttacaaaaggg
tatgggcactatgtagaagggactggctcagttctgcagacagcagtagatgtgcagctt
gaatcagtgtttaagcacattgagagtttaacagaagaagagaagcttatgaaactgaca
acactaaaactgaggtattttactccaagagaaatagcaaatctgcatggattccctcca
gaatttggctttcctgacaaagtatcaataaagcaatgctaccggcttctgggaaatagc
ctcaacgtacgtgtggtggcaaaactgatctccattctacttgggtaa
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