KEGG   Coturnix japonica (Japanese quail): 107310410
Entry
107310410         CDS       T04297                                 
Symbol
POLR2K
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform X1
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03020  RNA polymerase
cjo03420  Nucleotide excision repair
cjo04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107310410 (POLR2K)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107310410 (POLR2K)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    107310410 (POLR2K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjo03021]
    107310410 (POLR2K)
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107310410 (POLR2K)
Transcription machinery [BR:cjo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107310410 (POLR2K)
  RNA polymerase III system
   RNA polymerase III
     107310410 (POLR2K)
  RNA polymerase I system
   RNA polymerase I
     107310410 (POLR2K)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107310410 (POLR2K)
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon Cytochrome_C7 MCM_OB DUF5816 HypA DZR zinc_ribbon_13
Other DBs
NCBI-GeneID: 107310410
NCBI-ProteinID: XP_015711491
LinkDB
Position
2:116286604..116290453
AA seq 84 aa
MQTRPLRLCVVTPSFGAEGTARSVENMDSQKDVQPPKQQPMIYICGECHTENEIKARDPI
RCRECGYRIMYKKRTKRLVVFDAR
NT seq 255 nt   +upstreamnt  +downstreamnt
atgcagacccgccccctccggctttgcgtagtgacgccatcattcggcgccgaggggacg
gcgaggagtgtggagaacatggattcacagaaggacgttcagcccccaaagcagcagcca
atgatttacatttgtggagaatgtcatacagaaaatgaaataaaggcaagagatccgatc
agatgccgagagtgtgggtacagaataatgtacaagaaaagaacaaaaagattggtggtt
tttgatgcccggtga

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