Coturnix japonica (Japanese quail): 107313652
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Entry
107313652 CDS
T04297
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04010
MAPK signaling pathway
cjo04210
Apoptosis
cjo04218
Cellular senescence
cjo04620
Toll-like receptor signaling pathway
cjo04621
NOD-like receptor signaling pathway
cjo04622
RIG-I-like receptor signaling pathway
cjo04623
Cytosolic DNA-sensing pathway
cjo04625
C-type lectin receptor signaling pathway
cjo04920
Adipocytokine signaling pathway
cjo05132
Salmonella infection
cjo05164
Influenza A
cjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107313652 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107313652 (NFKB1)
04218 Cellular senescence
107313652 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107313652 (NFKB1)
04621 NOD-like receptor signaling pathway
107313652 (NFKB1)
04622 RIG-I-like receptor signaling pathway
107313652 (NFKB1)
04623 Cytosolic DNA-sensing pathway
107313652 (NFKB1)
04625 C-type lectin receptor signaling pathway
107313652 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
107313652 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107313652 (NFKB1)
05168 Herpes simplex virus 1 infection
107313652 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
107313652 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107313652 (NFKB1)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107313652 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
107313652
NCBI-ProteinID:
XP_015717578
UniProt:
A0A8C2Y8F0
LinkDB
All DBs
Position
4:54702493..54756447
Genome browser
AA seq
982 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQLMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGGFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMFGGGGGGAGSGFSYPSYGYPAFGGMHFHPG
TTKSNAGMKHELSSSTVEKHEESSDKQSDKWDTKHDVKVETMEKNECRTSGHNEEKEDTS
LCCKDEGNKAKCGCQDGLFLEKAMQLAKRHCNALFDYAITGDVRMLLAVQRHLTAVQDDN
GDNVLHLSIIHLHRELVKNLLEVMPDMNYNNIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGANVNLLDRHGNSVLHLAAAEGDDKILGLLLKHKKASSMIDLSNGEGLSAIHMVVIAN
SLSCLKLLLAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGFTKLAAVLKAAGADPHIENFEPLFDVEEDVKDDDDEGIVPGTTPLDMAANWE
VYDILNGKPYIAAAAVSEDLLTQGPLRELNESSKQQLYKLLETPDPSKNWATLAEKLGLG
ILNNAFGLSPSPSKTLLDNYKISGGTVQELIAALRQMDHTEAIEVIQKALSSSQRQSHQE
DNAIEAFPSSSLANFAKGETGELYNHKFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSV
TLSKMTLGYGQESSVQGNYIPD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaggatccatatatcatgggagtgtcagatccccaaatgtttgcaatggac
cagctcatgggaatgaatacaatatttaataatacaggttacatcacctcagacttacca
ctacgaacagcagatggaccgtatcttcaaatcattgaacagccaaaacagaggggtttt
cgattccgatatgtatgcgaagggccttcacatggtggacttcctggtgcttccagtgaa
aagaacaaaaagtcatacccccaagtgaagatttgcaactatgtcggacctgccaaagtg
atcgtccagttagttactaatgggaaatacgtccatttacacgcccacagcttggtgggt
aaattttgtgaagatggagtgtgcacagtcaatgcaggaccgaaagacatggtcgttggg
tttgcaaaccttggaatacttcacgtcacgaagaagaaagtgtttgaaactctggaaaca
cgcatgatcgatgcttgcaaaaaaggatacaacccaggactcttggtgcatcctgaactc
ggctatctgcaggcagaaggatgtggagacaggcagctaactgaacgagagagagaaatt
attcgccaggcagcggtacagcagacaaaagaaatggatctcagcgtggtgcgtcttatg
tttacagcctttcttcctgacagtaatggtggtttcacacggaggcttgatcctgttata
tcggatgcaatatatgacagcaaagcacccaatgcctccaacttgaaaattgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgcgacaaggtt
cagaaagatgatattcagatccgtttctatgaagaggatgagaatggcggtatgtgggag
ggctttggagacttttctcctacggatgtacatagacaatttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtgcagctacgtcgg
aaatctgatctagaaacgagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcagaggaagaggcagaagctcatgccaaacttctccgatggttacggt
ggaggcagcggcgcaggaggcggtggcatgtttggaggaggaggtggcggtgctggctct
gggttcagttatccttcctatggttaccctgcttttggaggaatgcatttccaccctggc
acaacgaagtccaatgccggaatgaaacatgagctgtcaagtagcacagttgaaaaacat
gaagagagctctgataaacaaagtgacaaatgggacacaaagcatgatgtgaaagtggaa
actatggagaagaatgagtgcagaacctctggtcataatgaggagaaagaggatacttct
ttgtgctgtaaagatgaaggaaacaaagcaaagtgtggttgccaggatggtctgttcctg
gagaaggcaatgcagcttgccaagcgtcactgcaacgctctctttgattatgctataact
ggagatgtgaggatgctgctcgctgttcagcgccatctcactgctgtccaggatgacaat
ggagacaacgtcctgcatttgtcaattatccaccttcatagagaactggttaaaaacctc
ttggaagtgatgccagatatgaattataacaacattatcaacatgagaaacgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggtagaagacttgctg
aaggctggagcaaatgtcaaccttttggatcgccacggtaactctgtcttacatttagct
gctgctgaaggagatgacaagattctgggtctgctcctcaagcataagaaggcatcttca
atgatcgacctttccaatggtgaaggtctcagtgcaattcacatggtggtgatcgccaat
agcttgtcctgtctgaaactgctgcttgctgctggagttaacgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgaacaggagaacatccccttggcaggc
tgccttttgctcgagggtgatgcagatgtggacagcactacatacgacggcacaacgcct
cttcacatagcagctggaaggggctttacgaagctggcagcagttctcaaagcagcaggt
gcagatcctcacattgagaactttgagccgctctttgatgttgaagaagatgtgaaagat
gatgatgatgaagggattgtacctggaacaacaccactggacatggcagccaactgggag
gtgtatgacatattaaatggcaaaccctacatagcagcagcagcagtttcggaggactta
ctgacacaaggccctctgagggagctgaatgaaagctccaagcagcagctttacaagcta
ttggaaacacctgatccaagcaagaactgggctactctagcagaaaagctggggcttggc
attcttaataatgccttcggattgagcccttcaccctcaaaaactctgctagataactat
aagatttctggaggtacagttcaggagctgattgctgctttgagacagatggatcacaca
gaggctattgaagtaattcagaaagcactatccagctctcagaggcagtctcaccaggag
gacaatgcaatagaagcttttccttcatcatcgcttgccaattttgcgaagggagagaca
ggtgaactttataatcacaaattccaagacactgaaagcacatgtgacagtggtgtagag
acctccttccgcaaactgagctttacttactcagactctctgaacagcaaatcatccgta
acacttagcaaaatgaccctgggctatggccaggaaagctcggtgcaaggcaattatata
cccgactag
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